New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4038846	61 (1.240)	4 (0.090)	4/242	NT	6.3%	coding (645/849 nt)	PP_3559	glycine betaine ABC transporter permease
	?	NC_002947	= 4038866	62 (1.330)					coding (665/849 nt)	PP_3559	glycine betaine ABC transporter permease

GTGCGGTTGACCGAACTGGGCCTGAGCCAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAGGGATGGAGGCCGGGCTGGCAATTGTCGCCCTGGCCATGGTGATCGAC  >  NC_002947/4038718‑4039014                                                                                                                                                     |                                                                                                                                                     gTGCGGTTGACCGAACTGGGCCTGAGCCAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGt                                                                                                                                                      <  2:67854/149‑1 (MQ=255) gTGCGGTTGACCGAACTGGGCCTGAGCCAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGt                                                                                                                                                      >  4:141992/1‑149 (MQ=255)  tGCGGTTGACCGAACTGGGCCTGAGCCAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGt                                                                                                                                                      >  6:21433/1‑148 (MQ=255)      gTTGACCGAACTGGGCCTGAGCCAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTcatga                                                                                                                                                 <  4:72776‑M2/149‑6 (MQ=255)           ccGAACTGGGCCTGAGCCAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGcc                                                                                                                                            <  3:141992/149‑1 (MQ=255)                cTGGGCCTGAGCCAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTc                                                                                                                                       >  3:3884/1‑149 (MQ=255)                    gCCTGAGCCAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGAtg                                                                                                                                   <  1:32384/149‑1 (MQ=255)                         aGCCAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGAtggtgg                                                                                                                               <  7:235255/148‑1 (MQ=255)                         aGCCAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGAtggtg                                                                                                                                <  4:199287/147‑1 (MQ=255)                           ccAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCg                                                                                                                            >  6:160551/1‑149 (MQ=255)                             aGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTca                                                                                                                                                    >  1:49937‑M2/1‑121 (MQ=255)                             aGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTca                                                                                                                                                    <  2:49937‑M2/123‑3 (MQ=255)                              gATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTgg                                                                                                                         >  1:52163/1‑149 (MQ=255)                              gATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTgg                                                                                                                         >  5:114266/1‑149 (MQ=255)                                     cccTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGAtg                                                                                                                                   <  5:316279/132‑1 (MQ=255)                                     cccTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGAtg                                                                                                                                   >  6:316279/1‑132 (MQ=255)                                     cccTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCgat                                                                                                                  >  6:205337/1‑149 (MQ=255)                                     cccTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCgat                                                                                                                  <  2:52163/149‑1 (MQ=255)                                                 cAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGCCGATCATCGACGcca                                                                                                       <  5:21433/148‑2 (MQ=255)                                                   ggCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTg                                                                                                    >  1:107496/1‑149 (MQ=255)                                                      cGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGAtgg                                                                                                                                  >  7:103767/1‑116 (MQ=255)                                                      cGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGAtgg                                                                                                                                  <  8:103767/116‑1 (MQ=255)                                                         acacGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTgg                                                                                              <  6:114266/149‑1 (MQ=255)                                                         acacGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTgg                                                                                              <  3:72776/149‑1 (MQ=255)                                                           acGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGAtg                                                                                                                                   >  5:248063/1‑110 (MQ=255)                                                           acGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGAtg                                                                                                                                   <  6:248063/110‑1 (MQ=255)                                                           acGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGt                                                                                            >  4:16054/1‑149 (MQ=255)                                                               ccgtGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAg                                                                                        <  8:50213/146‑1 (MQ=255)                                                               ccTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTg                                                                                           >  8:66832/1‑146 (MQ=255)                                                               ccTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAg                                                                                        <  5:160551/149‑1 (MQ=255)                                                                     cgcAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGc                                                                                  >  6:50103/1‑149 (MQ=255)                                                                        aaGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTgg                                                                               >  7:247681/1‑149 (MQ=255)                                                                        aaGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTgg                                                                               <  3:146734/149‑1 (MQ=255)                                                                           ccGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCgg                                                                            >  1:271234/1‑149 (MQ=255)                                                                           ccGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCgg                                                                            <  4:3884/149‑1 (MQ=255)                                                                            cGCTGGCAGCGGTTGCGGCGCATCGCCCAGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCgg                                                                            >  1:176348/1‑148 (MQ=255)                                                                             gCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCggg                                                                           >  2:152216/1‑148 (MQ=255)                                                                                  cAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCa                                                                     <  2:107496/149‑1 (MQ=255)                                                                                  cAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCa                                                                     <  5:50103/149‑1 (MQ=255)                                                                                     cGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGAc                                                                  <  7:252733/149‑1 (MQ=255)                                                                                        ttGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATc                                                                       >  8:287645/1‑141 (MQ=255)                                                                                        ttGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATc                                                                       <  7:287645/141‑1 (MQ=255)                                                                                           cggcgCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGaa                                                            >  1:198674/1‑149 (MQ=255)                                                                                             gcgcATCGCCCTGCCCCTGGCGCTACCAAGTATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATg                                                          >  7:88856/1‑149 (MQ=255)                                                                                             gcgcATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATg                                                          <  7:66832/149‑1 (MQ=255)                                                                                                cATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAg                                                                    <  3:9923/136‑1 (MQ=255)                                                                                                cATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAg                                                                    >  4:9923/1‑136 (MQ=255)                                                                                                cATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTg                                                       >  2:99453/1‑149 (MQ=255)                                                                                                 aTCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTgg                                                      <  8:66810/149‑1 (MQ=255)                                                                                                      ccTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAg                                                 <  2:120742/149‑1 (MQ=255)                                                                                                       cTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAgg                                                >  8:85164/1‑149 (MQ=255)                                                                                                          ccccTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAGGGAt                                             <  5:205337/149‑1 (MQ=255)                                                                                                            ccTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAGGGATgg                                           <  1:152216/149‑1 (MQ=255)                                                                                                                    tACCAAGCATCATGGCCGGGCTCAACCAGTCGGTcatgatgcttggtagcgccaggggcagggcgatgcgccgcaaccgctgccagcggcttgcgccaaggccgtgtgcggcctgcagcaacgaggggtcgatctg                                                <  7:130397‑M2/136‑103 (MQ=255)                                                                                                                    tACCAAGCATCATGGCCGGGCTCAACCAGTCGGTcatgatgcttggtagcgccaggggcagggcgatgcgccgcaaccgctgccagcggcttgcgccaaggccgtgtgcggcctgcagcaacgaggggtcgatctg                                                >  8:130397‑M2/1‑34 (MQ=255)                                                                                                                        aaGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGTCCAAGGGATGGAGGCCGGGCTgg                               <  2:198674/149‑1 (MQ=255)                                                                                                                        aaGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAGGGATGGAGGCCGGGCTgg                               <  2:157292/149‑1 (MQ=255)                                                                                                                         aGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGAATTTTCGATGGTGGTCGTGGCGTCGATGATCTGCTCCCGTGGATTGGGTGAAGATGTGATGCCGGTAATAAATAAATTTAATGTTGGCCAAGGGATGGAGGCCgggaggg                               >  2:194549/1‑144 (MQ=255)                                                                                                                             tcatGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAGGGATGGAGGCCGGGCTGGCAAtt                          <  1:158702/149‑1 (MQ=255)                                                                                                                              catGGCCGGGCTCAACCAGTCGGTcatgatgcttggtagcgccaggggcagggcgatgcgccgcaaccgctgccagcggcttgcgccaag                                                                                    <  5:296674‑M2/90‑67 (MQ=255)                                                                                                                              catGGCCGGGCTCAACCAGTCGGTcatgatgcttggtagcgccaggggcagggcgatgcgccgcaaccgctgccagcggcttgcgccaag                                                                                    >  6:296674‑M2/1‑24 (MQ=255)                                                                                                                                 ggCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAGGGATGGAGGCCGGGCTGGCAATTGTCg                      >  2:272087/1‑149 (MQ=255)                                                                                                                                  gCCGGGCTCTACCAGTCGGTCTTGATTGCGTTGTCTATGGTGGTCGTGGGGTCGATGATCGGCGCCCGTGGATTGGTTGTAGATGTGCTGGCTGGAATCCAGACCTTGATTGTTGGCCAAGGGATGGATGCGGGGCTGGCAATTGTCg                      <  4:119265/148‑1 (MQ=255)                                                                                                                                  gCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAGGGATGGAGGCCGGGCTGGCAATTGTCGc                     >  4:235535/1‑149 (MQ=255)                                                                                                                                  gCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAGGGATGGAGGCCGGGCTGGCAATTGTCGc                     <  3:16054/149‑1 (MQ=255)                                                                                                                                   ccGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGAGGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAGGGATGGAGGCCGGGCTGGCAATTGTCGcc                    >  6:241027/1‑149 (MQ=255)                                                                                                                                       gCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAGGGATGGAGGCCGGGCTGGCAATTGTc                       >  2:205614/1‑142 (MQ=255)                                                                                                                                       gCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAGGGATGGAGGCCGGGCTGGCAATTGTc                       <  1:205614/142‑1 (MQ=255)                                                                                                                                       gCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAGGGATGGAGGCCGGGCTGGCAATTGTCGCCCTgg                >  2:244508/1‑149 (MQ=255)                                                                                                                                           aaCCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAGGGATGGAGGCCGGGCTGGCAATTGTCGCCCTGGcc              <  1:244508/147‑1 (MQ=255)                                                                                                                                             ccAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAGGGATGGAGGCCg                                     >  3:130593/1‑122 (MQ=255)                                                                                                                                             ccAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAGGGATGGAGGCCg                                     <  4:130593/122‑1 (MQ=255)                                                                                                                                             ccAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAGGGATGGAGGCCGGGCTGGCAATTGTCGCCCTGGCCATgg          <  2:176348/149‑1 (MQ=255)                                                                                                                                                 tCGGTCATGATGTCCGTGTCGAAGGTGGTCGTTGCGTCGATGATCGGCGACCGTGGATTGGGTGAAGATGTGATGGCGGGAATCCAGACCTTGAATTTTGGCCAAGGGATGGCGGACGGGCTGGCAATTGTCGCCAAGGCCATGGTTAt      >  4:143488/1‑149 (MQ=255)                                                                                                                                                 tCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAGGGATGGAGGCCGGGCTGGCAATTGTCGCCCTGGCCATGGTGAt      <  1:99453/149‑1 (MQ=255)                                                                                                                                                 tCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATGGGGTGAAGATGTGCTGGCGGGATTCCAGACCTTGATTGTTGGCCAAGGGATGGAGGCCGGGCTGGCAATTGTCGCCCTGGCCATGGTGAt      >  2:24631/1‑149 (MQ=255)                                                                                                                                                   ggTcatgatgcttggtagcgccaggggcagggcgatgcgccgcaaccgctgccagcggcttgcgccaaggccgtgtgcggcctgcagcaacgaggggtcgatctgg                                               >  2:254267‑M2/1‑3 (MQ=255)                                                                                                                                                   ggTcatgatgcttggtagcgccaggggcagggcgatgcgccgcaaccgctgccagcggcttgcgccaaggccgtgtgcggcctgcagcaacgaggggtcgatctgg                                               <  1:254267‑M2/106‑104 (MQ=255)                                                                                                                                                     tCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAGGGATGGAGGCCGGGCTGGCAATTGTCGCCCTGGCCATGGTGATCGAc  <  2:271234/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GTGCGGTTGACCGAACTGGGCCTGAGCCAGATCGACCCCTCGTTGCTGCAGGCCGCACACGGCCTTGGCGCAAGCCGCTGGCAGCGGTTGCGGCGCATCGCCCTGCCCCTGGCGCTACCAAGCATCATGGCCGGGCTCAACCAGTCGGTCATGATGGCCTTGTCGATGGTGGTCGTGGCGTCGATGATCGGCGCCCGTGGATTGGGTGAAGATGTGCTGGCGGGAATCCAGACCTTGAATGTTGGCCAAGGGATGGAGGCCGGGCTGGCAATTGTCGCCCTGGCCATGGTGATCGAC  >  NC_002947/4038718‑4039014

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.