| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4060960 | 36 (0.730) | 4 (0.080) | 4/246 | NT | 9.7% | intergenic (‑62/‑112) | pgm/PP_3579 | phosphoglucomutase/membrane protein |
| ? | NC_002947 | = 4061004 | 40 (0.840) | intergenic (‑106/‑68) | pgm/PP_3579 | phosphoglucomutase/membrane protein | |||||
CCGGGGAATATCGACCAGCACGCTGGCCGGAGCCGGCTTGCCTGCCAAAGGACTGAGCGTCATGCAAAAACCTCGAGTTCAACGGATGTTGGTGTTGGAACGTGCAGTGTACTGAGAGTTGCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4060836‑4060960‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaatACCCTGCAGGGCCTGGGGTTTCTTTGATGCCCCCATCGCACGGCATTGCAACTCTCAGTACACTGCACGTTCCAACACCAACATCCGTTGAACTCGAGGTTTTTGCATGACGCTCAGTCCTTTGGCAGGCAAGCCGGCTCCGGCCAGC < NC_002947/4061004‑4060857 CCGGGGAATATCGACCAGCACGCTGGCCGGAGCCGGCTTGCCTGCCAAAGGACTGAGCGTCATGCAAAAACCTCGAGTTCAACGGATGTTGGTGTTGGAACGTGCAGTGTACTGAGAGTTGCAA < 3:117114/124‑1CCGGGGAATATCGACCAGCACGCTGGCCGGAGCCGGCTTGCCTGCCAAAGGACTGAGCGTCATGCAAAAACCTCGAGTTCAACGGATGTTGGTGTTGGAACGTGCAGTGTACTGAGAGTTGCAA > 4:117114/1‑124 GCTGGCCGGAGCCGGCTTGCCTGCCAAAGGACTGAGCGTCATGCAAAAACCTCGAGTTCAACGGATGTTGGTGTTGGAACGTGCAGTGTACTGAGAGTTGCAATACCCTGCAGGGCCTGGGGTTTCTTTGATGCCCCCATCGCACGGCA > 3:150101/1‑149 CGGAGCCGGCTTGCCTGCCAAAGGACTGAGCGTCATGCAAAAACCTCGAGTTCAACGGATGTTGGTGTTGGAACGTGCAGTGTACTGAGAGTTGCAATACCCTGCAGGGCCTGGGGTTTCTTTGATGCCCCCATCGCACGGCATTGCAA < 4:150101/149‑1 CTGCCAAAGGACTGAGCGTCATGCAAAAACCTCGAGTTCAACGGATGTTGGTGTTGGAACGTGCAGTGTACTGAGAGTTGCAATACCCTGCAGGGCCTGGGGTTTCTTTGATGCCCCCACCGCACGGCA < 5:180058/129‑1 CTGCCAAAGGACTGAGCGTCATGCAAAAACCTCGAGTTCAACGGATGTTGGTGTTGGAACGTGCAGTGTACTGAGAGTTGCAATACCCTGCAGGGCCTGGGGTTTCTTTGATGCCCCCACCGCACGGCA > 6:180058/1‑129 GCAATACCCTGCAGGGCCTGGGGTTTCTTTGATGCCCCCATCGCACGGCATTGCAACTCTCAGTACACTGCACGTTCCAACACCAACATCCGTTGAACTCGAGGTTTTTGCATGACGCTCAGTCCTTTGGCAGGCAAGCCGGCTCCGGC > 1:209187/1‑149 AATACCCTGCAGGGCCTGGGGTTTCTTTGATGCCCCCATCGCACGGCATTGCAACTCTCAGTACACTGCACGTTCCAACACCAACATCCGTTGAACTCGAGGTTTTTGCATGACGCTCAGTCCTTTGGCAGGCAAGCCGGCTCCGGCCA < 1:210511/149‑1 TACCCTGCAGGGCCTGGGGTTTCTTTGATGCCCCCATCGCACGGCATTGCAACTCTCAGTACACTGCACGTTCCAACACCAACATCCGTTGAACTCGAGGTTTTTGCATGACGCTCAGTCCTTTGGCAGGCAAGCCGGCTCCGGCCAGC > 7:41251/1‑149 CCGGGGAATATCGACCAGCACGCTGGCCGGAGCCGGCTTGCCTGCCAAAGGACTGAGCGTCATGCAAAAACCTCGAGTTCAACGGATGTTGGTGTTGGAACGTGCAGTGTACTGAGAGTTGCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4060836‑4060960‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaatACCCTGCAGGGCCTGGGGTTTCTTTGATGCCCCCATCGCACGGCATTGCAACTCTCAGTACACTGCACGTTCCAACACCAACATCCGTTGAACTCGAGGTTTTTGCATGACGCTCAGTCCTTTGGCAGGCAAGCCGGCTCCGGCCAGC < NC_002947/4061004‑4060857 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |