| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4083542 | 42 (0.850) | 4 (0.080) | 3/250 | NT | 10.0% | coding (541/753 nt) | PP_3593 | amino acid ABC transporter substrate‑binding protein |
| ? | NC_002947 | = 4083578 | 31 (0.640) | coding (577/753 nt) | PP_3593 | amino acid ABC transporter substrate‑binding protein | |||||
CCGTCGGTGCGCAGTCTTCCTCTACCCAGGCCATCTACGCCGAAGACGTGTACGGCAAGGCCGGTGCCGACGTGAAACTGTACCCGACCATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4083393‑4083542‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatCCCCGCCGTTCTTGTTCATCCACTCGTGCAGCGGGAATTTGTCGGCAATCACGCCGTCCAGGCGGCCGGCCGCCAGGTCTGCGTTGGCTTCGTCCATGGTCGGGTACAGTTTCACGTCGGCACCGGCCTTGCCGTACACGTCTTCGGC < NC_002947/4083578‑4083431 CCGTCGGTGCGCAGTCTTCCTCTACCCAGGCCATCTACGCCGAAGACGTGTACGGCAAGGCCGGTGCCGACGTGAAACTGTACCCGACCATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAA < 7:67255/149‑1 CGTCGGTGCGCAGTCTTCCTCTACCCAGGCCATCTACGCCGAAGACGTGTACGGCAAGGCCGGTGCCGACGTGAAACTGTACCCGACCATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAAT > 6:65433/1‑149 GACGTGTACGGCATGGCCGGTGCCGACGTGAAACTGTACCCGACCATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATCCCCGCCGTTCTTGTTCATCCACTCGTGCAGCGGGAATTTGTC < 3:188399/149‑1 GACGTGTACGGCAAGGCCGGTGCCGACGTGAAACTGTACCCGACCATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCCGTTCTTGTTCATCCACTCGTGCAGCGGGAATTTGTC < 5:281710/149‑1 CATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATCCCCGCCGTTCTTGTTCATCCACTCGTGCAGCGGGAATTTGTCG < 7:43612/106‑1 CATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATCCCCGCCGTTCTTGTTCATCCACTCGTGCAGCGGGAATTTGTCG > 8:43612/1‑106 TCCCCGCCGTTCTTGTTCATCCACTCGTGCAGCGGGAATTTGTCGGCAATCACGCCGTCCAGGCGGCCGGCCGCCAGGTCTGCGTTGGCTTCGTCCATGGTCGGGTACAGTTTCCCGTCGGCACCGGCCTTGCCGTACACGTCTTCGGC < 8:23010/149‑1 CCGTCGGTGCGCAGTCTTCCTCTACCCAGGCCATCTACGCCGAAGACGTGTACGGCAAGGCCGGTGCCGACGTGAAACTGTACCCGACCATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4083393‑4083542‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatCCCCGCCGTTCTTGTTCATCCACTCGTGCAGCGGGAATTTGTCGGCAATCACGCCGTCCAGGCGGCCGGCCGCCAGGTCTGCGTTGGCTTCGTCCATGGTCGGGTACAGTTTCACGTCGGCACCGGCCTTGCCGTACACGTCTTCGGC < NC_002947/4083578‑4083431 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |