New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4083542	42 (0.850)	4 (0.080)	3/250	NT	10.0%	coding (541/753 nt)	PP_3593	amino acid ABC transporter substrate‑binding protein
	?	NC_002947	= 4083578	31 (0.640)					coding (577/753 nt)	PP_3593	amino acid ABC transporter substrate‑binding protein

GCCGAAGACGTGTACGGCAAGGCCGGTGCCGACGTGAAACTGTACCCGACCATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATGCCGCCATCGCTGTGCGCAAGGACGACGAAGCCCTGCGCCAGCGCCTGAATACCGCGCTGCAACAGATTGTGGCCAACGGCACCTACCAG  >  NC_002947/4083431‑4083712                                                                                                                                                    |                                                                                                                                       gCCGAAGACGTGTACGGCAAGGCCGGTGCCGACGGGAAACTGTACCCGACCATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGa                                                                                                                                       <  8:23010‑M2/149‑2 (MQ=255)     aaGACGTGTACGGCAAGGCCGGTGCCGACGTGAAACTGTACCCGACCATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATtgc                                                                                                                                   <  5:65433/149‑1 (MQ=255)               cGGCATGGCGGGTGCCGACGTGAAACTGTACCCGACCATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATcc                                                                                                                         <  2:91499/149‑1 (MQ=255)                ggCAAGGCCGGTGCCGACGTGAAACTGTACCCGACCATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATtg                                                                                                                                    >  1:4090/1‑137 (MQ=255)                ggCAAGGCCGGTGCCGACGTGAAACTGTACCCGACCATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATtg                                                                                                                                    <  2:4090/137‑1 (MQ=255)                  cAAGGCCGGTGCCGTCGTGAAACTGTACCCGCCCATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTg                                                                                                                      <  4:200986/149‑1 (MQ=255)                  cAAGGCCGGTGCCGACGGGAAACTGTACCCGACCATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTg                                                                                                                      <  7:23010/149‑1 (MQ=255)                                aCGTGAAACTGTACCCGACCATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGa                                                                                                         >  1:24492/1‑148 (MQ=255)                                       aCTGTAACCGACCCTTGTCGAAGCCAACGCTGAGCTGTCGGCCGGCCGCCTGGACGGCTTGAATGCGGACAAAATCCCTCTGCACGAGTGGATTAACAAGAAAGGCGGGGATTGCTGGAAGATCCTTGGCGACGTGGCGGACACCaatg                                                                                                 <  8:126503/149‑3 (MQ=255)                                        cTGTACCCGACCATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGc                                                                                                >  7:69285/1‑149 (MQ=255)                                          gTACCCGACCATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCGAGGcc                                                                                               >  7:248724/1‑148 (MQ=255)                                                   cATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGAGGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGCCGTGGCGGACACCAAGGCCGCTgcggccc                                                                                     >  2:318255/1‑148 (MQ=255)                                                      ggACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATGCCGCCATCg                                                                                  >  1:194048/1‑149 (MQ=255)                                                       gACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATGCCGCCATCGc                                                                                 >  4:170420/1‑149 (MQ=255)                                                         cGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCGAGGCCGATGCCGCCATCGCtg                                                                               <  8:248724/149‑1 (MQ=255)                                                               cAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATGCCGCCATCGCTGTgcgc                                                                          >  7:216737/1‑148 (MQ=255)                                                                aaCGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATGCCGCCATCGCTGTGCGCaa                                                                        <  3:170420/149‑1 (MQ=255)                                                                     aGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCg                                                                                                           <  5:204935/109‑1 (MQ=255)                                                                     aGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCg                                                                                                           >  6:204935/1‑109 (MQ=255)                                                                     aGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATGCCGCCATCGCTGTGCGCAAGgacg                                                                   <  2:216707/149‑1 (MQ=255)                                                                            gcggcCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATGCCGCCATCGCTGTGCGCAAGGACGACGAAGc                                                            >  7:151927/1‑149 (MQ=255)                                                                                    ccgccTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATGCCGCCATCGCTGTGCGCAAGGACGACGAAGCCCTGCGcc                                                    <  8:69285/149‑1 (MQ=255)                                                                                       ccTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATGCCGCCATCGCTGTGCGCAAGGACGACGAAGCCCTGCGCCAgc                                                 <  8:151927/149‑1 (MQ=255)                                                                                        ttGGTCGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATgccg                                                                                        <  2:230017/108‑1 (MQ=255)                                                                                        cTGGACGGCGTGATTGCCGACAAATTCACGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATgccg                                                                                        >  1:230017/1‑109 (MQ=255)                                                                                                         cGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGatttgtcggcaatcacgccgtccaggcggccggccgccaggtctgcgttggcttcgtccatg                                                                          <  7:43612‑M2/106‑63 (MQ=255)                                                                                                         cGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGatttgtcggcaatcacgccgtccaggcggccggccgccaggtctgcgttggcttcgtccatg                                                                          >  8:43612‑M2/1‑44 (MQ=255)                                                                                                         cGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATGCCGCCATCGCTGTGCGCAAGGACGACGAAGCCCTGCGCCAGCGCCTGAATACCGCGCTg                                >  4:43987/1‑148 (MQ=255)                                                                                                          gACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGatttgtcggcaatcacgccgtccaggcggccggccgccaggtctgcgttggcttcgtccatggtcgggtacagtttcacgtcggcaccggccatgccgtacacgtc                              <  3:188399‑M2/149‑107 (MQ=255)                                                                                                          gACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGAatttgtcggcaatcacgccgtccaggcggccggccgccaggtctgcgttggcttcgtccatggtcgggtacagtttcacgtcggcaccggccttgccgtacacgtc                              <  5:281710‑M2/149‑107 (MQ=255)                                                                                                             aaaTTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCCATGCCGCCATCGCTGTGCGCAAGGACGACGAAGCCCTGCGCCAGCGCCTGAATACCGCGCTGCaa                             >  8:105797/1‑147 (MQ=255)                                                                                                                ttCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATGCCGCCATCGCTGTGCGCAAGGACGACGAAGCCCTGCGCCAGCGCCTGAATACCGCGCTGCAACAGAt                        <  2:24492/149‑1 (MQ=255)                                                                                                                    cGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATGCCGCCATCGCTGTGCGCAAGGACGACGAAGCCCTGCGCCAGCGCCTGAATACCGCGCTGCAACAGATtgtg                    <  3:43987/149‑1 (MQ=255)                                                                                                                    cGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATGCCGCCATCGCTGTGCGCAAGGACGACGAAGCCCTGCGCCAGCGCCTGAATACCGCGCTGCAACAGATtgtg                    <  2:194048/149‑1 (MQ=255)                                                                                                                      cTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATGCCGCCATCGCTGTGCGCAAGGACGACGAAGCCCTGCGCCAGCGCCTGAATACcg                                     <  2:226130/130‑1 (MQ=255)                                                                                                                      cTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATGCCGCCATCGCTGTGCGCAAGGACGACGAAGCCCTGCGCCAGCGCCTGAATACcg                                     >  1:226130/1‑130 (MQ=255)                                                                                                                            gAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATGCCGCCATCGCTGTGCGCAAGGACGACGAAGCCCTGCGCCAGCGCCTGAATACCGCGCTGCAACAGATTGTGGCCAACgg            >  1:268291/1‑149 (MQ=255)                                                                                                                                ggATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATGCCGCCATCGCTGTGCGCAAGGACGACGAAGCCCTGCGCCAGCGCCTGAATACCGCGCTGCAACAGATTGTGGCCAACGGCAcc        >  6:197643/1‑149 (MQ=255)                                                                                                                                           aaCGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATGCCGCCATCGCTGTGCGCAAGGACGACGAAGCCCTGCGCCAGCGCCTGAATACCGCGCTGCAACAGATTGTGGCCAACGGCACCTACCag  >  7:139003/1‑144 (MQ=255)                                                                                                                                                    |                                                                                                                                       GCCGAAGACGTGTACGGCAAGGCCGGTGCCGACGTGAAACTGTACCCGACCATGGACGAAGCCAACGCAGACCTGGCGGCCGGCCGCCTGGACGGCGTGATTGCCGACAAATTCCCGCTGCACGAGTGGATGAACAAGAACGGCGGGGATTGCTGCAAGATCCTTGGCGACGTGGCGGACACCAAGGCCGATGCCGCCATCGCTGTGCGCAAGGACGACGAAGCCCTGCGCCAGCGCCTGAATACCGCGCTGCAACAGATTGTGGCCAACGGCACCTACCAG  >  NC_002947/4083431‑4083712

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.