New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4819242 = | 49 (0.990) | 3 (0.060) | 3/244 | NT | 6.2% | coding (11948/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
? | NC_002947 | 4819316 = | 44 (0.940) | coding (11874/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
CAGGGCCTGCTGGCGCACGTGCAGGCCACCGGCATCACCGTGCTGGAGAGCGTGCCGTCCCTGATCCAGGGCATGCTGGCCAGCGACCACCAGGCCCTCGACGGCCTGCGCTGGATGCTGCCGACCGGCGAGGTCATGCCACCGGAGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4819393‑4819242 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGC > NC_002947/4819316‑4819394 CAGGGCCTGCTGGCGCACGTGCAGGCCACCGGCATCACCGTGCTGGAGAGCGTGCCGTCCCTGATCCAGGGCATGCTGGCCAGCGACCACCAGGCCCTCGACGGCCTGCGCTGGATGCTGCCGACCGGCGAGGTCATGCCACCGGAGCT < 4:250806/149‑1 AGGGCCTGCTGGCGCACGTGCAGGCCACCGGCATCACCGTGCTGGAGAGCGTGCCGTCCCTGATCCAGGGCATGCTGGCCAGCGACCACCAGGCCCTCGACGGCCTGCGCTGGATGCTGCCGACCGGCGAGGTCATGCCACCGGAGCTG < 5:259772/149‑1 TGGCCAGCGACCACCAGGCCCTCGACGGCCTGCGCTGGATGCTGCCGACCGGCGAGGTCATGCCACCGGAGCTGGCCAGCATGCCCTGGATCAGGGAAGTCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGG > 1:291110/1‑149 GCCAGCGACCACCAGGCCCTCGACGGCCTGCGCTGGATGCTGCCGACCGGCGAGGTCATGCCACCGGAGCTGGCCAGCATGCCCAGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCC > 1:91551/1‑149 GCGACCACCAGGCCCTCGACGGCCTGCGCTGGATGCTGCCGACCGGCGAGGTCATGCCACCGGAGCTGGCCAGCATGCCCAGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGC < 2:91551/149‑1 CAGGGCCTGCTGGCGCACGTGCAGGCCACCGGCATCACCGTGCTGGAGAGCGTGCCGTCCCTGATCCAGGGCATGCTGGCCAGCGACCACCAGGCCCTCGACGGCCTGCGCTGGATGCTGCCGACCGGCGAGGTCATGCCACCGGAGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4819393‑4819242 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGC > NC_002947/4819316‑4819394 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |