New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4819242 =	49 (0.990)	3 (0.060)	3/244	NT	6.2%	coding (11948/12954 nt)	pvdL	non‑ribosomal peptide synthetase
	?	NC_002947	4819316 =	44 (0.940)					coding (11874/12954 nt)	pvdL	non‑ribosomal peptide synthetase

GTCATCCGAGCACTCCGCCGGGCCATAGGCATTGACCAGGCCGATCTGCGGGTAGCGCTGCAGCCACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGACATTAGGCACGATCTCTACCTTGGCGCCGAACAGCGGCGCAGC  >  NC_002947/4819169‑4819453                                                                                                                                                    |                                                                                                                                          cctgctggcgcacgtgcaggccaccggcatcaccgtgctggagagcgtgacttccctgatccagggcatgctgGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCa                                                                                                                                          >  1:291110‑M1/74‑149 (MQ=255)          gCACTCCGCCGGGCCATAGGCATTGACCAGGCCGATCTGCGGGTAGCGCTGCAGCCACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCt                                                                                                                                 <  2:248971/149‑1 (MQ=255)             cTCCGCCGGGCCATAGGCATTGACCAGGCCGATCTGCGGGTAGCGCTGCAGCCACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGa                                                                                                                              <  6:27969/149‑1 (MQ=255)              tCCGCCGGGCCATAGGCATTGACCAGGCCGATCTGCGGGTAGCGCTGCAGCCACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGAt                                                                                                                             >  6:266467/1‑149 (MQ=255)              tCCGCCGGGCCATAGGCATTGACCAGGCCGATCTGCGGGTAGCGCTGCAGCCACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGAt                                                                                                                             >  5:327146/1‑149 (MQ=255)                cgccgGTCCATAGGCATTGACCAGGCCGATCTGCGGGTAGCGCTGCAGCCACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCa                                                                                                                           <  6:327146/149‑1 (MQ=255)                    gggCCATAGGCATTGACCAGGCCGATCTGCGGGTAGCGCTGCAGCCACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGa                                                                                                                       <  2:65684/149‑1 (MQ=255)                    gggCCATAGGCATTGACCAGGCCGATCTGCGGGTAGCGCTGCAGCCACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGa                                                                                                                       <  2:61103/149‑1 (MQ=255)                       ccATAGGCATTGACCAGGCCGATCTGCGGGTAGCGCTGCAGCCACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACgg                                                                                                                    >  5:55160/1‑149 (MQ=255)                             gCATTGACCAGGCCGATCTGCGGGTAGCGATGCAGCCACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGct                                                                                                              >  1:181989/1‑149 (MQ=255)                               aTTGACCAGGCCGATCTGCGGGTAGCGCTGCAGCCACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGTAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATc                                                                                                                            >  1:73182/1‑133 (MQ=255)                               aTTGACCAGGCCGATCTGCGGGTAGCGCTGCAGCCACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGTAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATc                                                                                                                            <  2:73182/133‑1 (MQ=255)                                        gCCGATCTGCGGGTAGCGCTGCAGCCACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACgg                                                                                                   >  4:202131/1‑149 (MQ=255)                                                        cgcTGCAGCCACTGCGCCGCCAGCTCCTGTGGCATGACCTCGCCGGTCGTCAGCATCCAGCGCAGGCCGTCGAGTGCCTGGTGGTCGCTTGCCAGCATGCCCTGGATCAGTGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCt                                                                                    <  7:250197/148‑1 (MQ=255)                                                        cgcTGCAGCCACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCa                                                                                                         <  3:158024/127‑1 (MQ=255)                                                        cgcTGCAGCCACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCa                                                                                                         >  4:158024/1‑127 (MQ=255)                                                         gcTGCAGCCTCTGCGCCGCCAGGTCCGGTGGGATGTCCTCGCCGGTGGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGc                                                                                  <  4:304579/149‑1 (MQ=255)                                                         gcTGCAGCCACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTg                                                                                   >  1:175095/1‑148 (MQ=255)                                                         gcTGCAGCCACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGc                                                                                  <  5:94281/149‑1 (MQ=255)                                                             cAGCCACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCAc                                                                                <  6:55160/147‑1 (MQ=255)                                                                ccACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACg                                                                                                    <  2:182608/124‑1 (MQ=255)                                                                ccACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACg                                                                                                    >  1:182608/1‑124 (MQ=255)                                                                  aCTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGGACGTgcgc                                                                          >  4:220555/1‑148 (MQ=255)                                                                    tGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCcag                                                                       >  2:298061/1‑149 (MQ=255)                                                                        tggccagcgaccaccaggccctcgacggcctgcgctggatgctgccgaccggcgaggtcatgccaccggagctggcCAGCATGCCCTGGATCAGGGAAGTCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAgg                                                                   >  1:291110‑M2/77‑149 (MQ=255)                                                                          gccagcgaccaccaggccctcgacggcctgcgctggatgctgccgaccggcgaggtcatgccaccggagctggcCAGCATGCCCAGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGcc                                                                 >  1:91551‑M2/75‑149 (MQ=255)                                                                            CAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCt                                                               <  5:259772‑M1/149‑1 (MQ=255)                                                                             AGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTg                                                              <  4:250806‑M1/149‑1 (MQ=255)                                                                              gcgaccaccaggccctcgacggcctgcgctggatgctgccgaccggcgaggtcatgccaccggagctggcCAGCATGCCCAGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGc                                                             <  2:91551‑M2/79‑1 (MQ=255)                                                                                  cGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCgg                                                           <  1:204284/147‑1 (MQ=255)                                                                                     tGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCAt                                                      <  6:259772/149‑1 (MQ=255)                                                                                       gCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCAGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATgg                                                    <  8:65942/149‑1 (MQ=255)                                                                                               tCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGa                                             >  3:75583/1‑148 (MQ=255)                                                                                                  ccGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGAGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGCCag                                          >  6:118722/1‑147 (MQ=255)                                                                                                   cGGTCGGCAGCATCCCGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGACAt                                          >  8:213455/1‑147 (MQ=255)                                                                                                     ggctgcagcaTCCAGCGCAGGCCGTCGAGGGCCTGGGGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGACATTAgg                                      <  5:118722/145‑1 (MQ=255)                                                                                                     gTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGACATTAgg                                      <  2:181989/149‑1 (MQ=255)                                                                                                         gcagcaTCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGACATTAGGCAc                                   >  7:262091/1‑148 (MQ=255)                                                                                                           agcaTCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGACATTAGGCACGAt                                <  8:262091/149‑1 (MQ=255)                                                                                                                 cAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGACATTAGGCa                                    >  5:278660/1‑139 (MQ=255)                                                                                                                 cAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGACATTAGGCa                                    <  6:278660/139‑1 (MQ=255)                                                                                                                   gcgcAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGACATTAGGCACGATCTCTACCt                        >  1:159616/1‑149 (MQ=255)                                                                                                                      cAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGACATTAGGCACGATCTCTACCTTgg                     >  5:126704/1‑149 (MQ=255)                                                                                                                       aGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGACATTAGGCACGATCTCTACCTTGgc                    <  6:126704/149‑1 (MQ=255)                                                                                                                         gCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGACATTAGGCACGATCTCTACCTTGgcgc                  <  1:298061/149‑1 (MQ=255)                                                                                                                          ccGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGACATTAGGCACGATCTCTACCTTGGCGcc                 <  5:266467/149‑1 (MQ=255)                                                                                                                                 gggCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGACATTAGGCACGATCTCTACCTTGGCGCCGAACAgc          <  5:233355/149‑1 (MQ=255)                                                                                                                                     cTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGACATTAGGCACGATCTCTACCTTGGCGCCGAACAgcggcg      >  1:43025/1‑149 (MQ=255)                                                                                                                                        gtggtCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGACATTAGGCACGATCTCTACCTTGGCGCCGAACAGCGGCGCAg   >  5:201476/1‑149 (MQ=255)                                                                                                                                        gtggtCGCTGGCCAGCATGCCCTGGAGCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGACATTAGGCACGATCTCTACCTTGGCGCCTAACAGCGGCGCa    <  3:220555/148‑1 (MQ=255)                                                                                                                                         tggtCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGACATTAGGCACGATCTCTACCTTGGCGCCGAACAGCGGCGCAGc  <  3:202131/149‑1 (MQ=255)                                                                                                                                         tggtCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGACATTAGGCACGATCTCTACCTTGGCGCCGAACAGCGGCGCAGc  <  3:250806/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                          GTCATCCGAGCACTCCGCCGGGCCATAGGCATTGACCAGGCCGATCTGCGGGTAGCGCTGCAGCCACTGCGCCGCCAGCTCCGGTGGCATGACCTCGCCGGTCGGCAGCATCCAGCGCAGGCCGTCGAGGGCCTGGTGGTCGCTGGCCAGCATGCCCTGGATCAGGGACGGCACGCTCTCCAGCACGGTGATGCCGGTGGCCTGCACGTGCGCCAGCAGGCCCTGCGGGTCATGGGCGATGACATTAGGCACGATCTCTACCTTGGCGCCGAACAGCGGCGCAGC  >  NC_002947/4819169‑4819453

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.