New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4875844 = | 30 (0.610) | 3 (0.060) | 3/240 | NT | 7.9% | coding (1032/1350 nt) | PP_4284 | transporter |
? | NC_002947 | 4875913 = | 42 (0.910) | coding (1101/1350 nt) | PP_4284 | transporter |
ACGATCGCCGGAATGCTGTCGGTGGCCTCATCCCAATGGATGTGCGCCATGCTGCCCATCATCAGCATCGCAACGTAGATCAGTGCACCTGCTGTCGCATAGGCCGGAATCATCCCGGCCAGCGGCGCGAAGAACATCGCGGCGATGAACAGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4875999‑4875844 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagcaggTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCGCCGATGGTATTGCCCTGGGCTTCAT > NC_002947/4875913‑4876059 ACGATCGCCGGAATGCTGTCGGTGGCCTCATCCCAATGGATGTGCGCCATGCTGCCCATCATCAGCATCGCAACGTAGATCAGTGCACCTGCTGTCGCATAGGCCGGAATCATCCCGGCCAGCGGCGCGAAGAACATCGCGGCGATGAA < 2:278506/149‑1 TCCCAATGGATGTGCGCCATGCTGCCCATCATCAGCATCGCAACGTAGATCAGTGCACCTGCTGTCGCATAGGCCGGAATCATCCCGGCCAGCGGCGCGAAGAACATCGCGGCGATGAA > 7:243856/1‑119 TCCCAATGGATGTGCGCCATGCTGCCCATCATCAGCATCGCAACGTAGATCAGTGCACCTGCTGTCGCATAGGCCGGAATCATCCCGGCCAGCGGCGCGAAGAACATCGCGGCGATGAA < 8:243856/119‑1 ACCTGCTGTCGCATAGGCCGGAATCATCCCGGCCAGCGGCGCGAAGAACTTCGCGGCGATGAACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTG < 8:19684/124‑1 ACCTGCTGTCGCATAGGCCGGAATCATCCCGGCCAGCGGCGCGAAGAACATCGCGGCGATGAACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTG > 7:19684/1‑124 CTGCTGTCGCATAGGCCGGAATCATCCCGGCCAGCGGCGCGAAGAACATCGCGGCGATGAACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGC > 4:69997/1‑149 GTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCGCAGATGGTATTGCCCTGGGCTTCAT > 8:282259/1‑148 ACGATCGCCGGAATGCTGTCGGTGGCCTCATCCCAATGGATGTGCGCCATGCTGCCCATCATCAGCATCGCAACGTAGATCAGTGCACCTGCTGTCGCATAGGCCGGAATCATCCCGGCCAGCGGCGCGAAGAACATCGCGGCGATGAACAGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4875999‑4875844 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagcaggTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGGCCACCGACAGCATTCCGGCGATCGTCACAGTGATCATGATGCCGCTGACGTTCTCGGTCGCCGATGGTATTGCCCTGGGCTTCAT > NC_002947/4875913‑4876059 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |