New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4875844 =	30 (0.610)	3 (0.060)	3/240	NT	7.9%	coding (1032/1350 nt)	PP_4284	transporter
	?	NC_002947	4875913 =	42 (0.910)					coding (1101/1350 nt)	PP_4284	transporter

CGAGAACCTGTCGAAGGCGTTGAAGGCTGACAGTGCCTCGAGTGTGTTCGGCGCGGTGGTCGGTGTACCGCCGGTGACCAGCTATGTGGAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGG  >  NC_002947/4875697‑4875974                                                                                                                                                    |                                                                                                                                   atgaagcccagggcaataccatctgcgaccgagaacgtcagcggcatcatgatcactgtgacgatcgccggaatgctgtcggtggcctcatcccaatggatgtgcgccatgctgcccatcatcagcatcgcaacgtagatcagtgcac                                                                                                                                    >  8:282259‑M1/148‑148 (MQ=255)   agaACCTGTCGAAGGCGTTGAAGGCTGACAGTGCCTCGAGTGTGTTCGGCGCGGTGGTCGGTGTACCGCCGGTGACCAGCTATGTGGAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCctg                                                                                                                                 >  5:256321/1‑149 (MQ=255)      aCCTGTCGAAGGCGTTGAAGGCTGACAGTGCCTCGAGTGTGTTCGGCGCGGTGGTCGGTGTACCGCCGGTGACCAGCTATGTGGAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCctgct                                                                                                                               <  6:108432/148‑1 (MQ=255)              aaGGTGTTGAAGGCTGACAGTGCCTCGAGTGTGTTCGGCGCGGTGGTCGGTGTACCGCCGGTGACCAGCTATGTGGAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGt                                                                                                                             <  2:270762/142‑1 (MQ=255)              aaGGAGTTGAAGGCTGACAGTGCCTCGAGTGTGTTCGGCGCGGTGGTCGGTGTACCGCCGGTGACCAGCTATGTGGAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGt                                                                                                                             >  1:270762/1‑142 (MQ=255)                                   gCCTCGAGTGTGTTCGGCGCGGTGGTCGGTGTACCGCCGGTGACCAGCTATGTGGAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCt                                                                                                 >  4:70901/1‑149 (MQ=255)                                      tCGAGTGTGTTCGGCGCGGTGGTCGGTGTACCGCCGGTGACCAGCTATGTGGAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGc                                                                                              >  6:210895/1‑149 (MQ=255)                                                   gcgcGGTGGTCGGTGTACCGCCGGTGACCAGCTATGTGGAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCg                                                                                 <  6:256321/149‑1 (MQ=255)                                                           gtCGGTGTACCGCCGGTGACCAGCTATGTGGAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCctgct                                                                                                                               <  6:219376/95‑1 (MQ=255)                                                           gtCGGTGTACCGCCGGTGACCAGCTATGTGGAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCctgct                                                                                                                               >  5:219376/1‑95 (MQ=255)                                                            tCGGTGTACCGCCGGTGACCAGCTATGTGGAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGAATCATCCCGGccagcggc                                                                        <  5:210895/149‑7 (MQ=255)                                                                  tACCGCCGGTGACCAGCTATGTGGAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGAcag                                                                    >  2:52884/1‑147 (MQ=255)                                                                   gccggaatgctgtcggtggcctcatcccaatggatgtgcgccatgctgcccatcatcagcatcgcaacgtagatcagtgcaCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGAcagcag                                                                 >  4:69997‑M1/82‑149 (MQ=255)                                                                    ccgccgGTGACCAGCTATGTGGAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAgg                                                                >  1:118011/1‑149 (MQ=255)                                                                       ccgGTGACCAGCTATGTGGAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGt                                                               >  8:12421/1‑147 (MQ=255)                                                                       ccgGTGACCAGCTATGTGGAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGt                                                               <  7:12421/147‑1 (MQ=255)                                                                             aCCAGCTATGTGGAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGAt                                                       >  7:223720/1‑149 (MQ=255)                                                                               cAGCTATGTGGAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGAt                                                       <  4:86069/147‑1 (MQ=255)                                                                               cAGCTATGTGGAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATca                                                     >  3:86069/1‑148 (MQ=255)                                                                                       tgGAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGc                                              >  1:111134/1‑148 (MQ=255)                                                                                        ggAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGa                                                        >  7:36541/1‑137 (MQ=255)                                                                                        ggAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGa                                                        <  8:36541/137‑1 (MQ=255)                                                                                           gagTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGcc                                                                                             >  5:166804/1‑97 (MQ=255)                                                                                           gagTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGcc                                                                                             <  6:166804/97‑1 (MQ=255)                                                                                              caatggatgtgcgccatgctgcccatcatcagcatcgcaacgtagatcagtgcaCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGt                                                               >  7:19684‑M1/55‑124 (MQ=255)                                                                                              caatggatgtgcgccatgctgcccatcatcagcatcgcaacgtagatcagtgcaCCTGCTGTTCATCGCCGCGAAGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGt                                                               <  8:19684‑M1/70‑1 (MQ=255)                                                                                                    gggggTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATgg                                <  3:70901/149‑1 (MQ=255)                                                                                                            ccGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCt                                        <  1:3812/133‑1 (MQ=255)                                                                                                            ccGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCt                                        >  2:3812/1‑133 (MQ=255)                                                                                                            ccGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATg                        <  2:173868/149‑1 (MQ=255)                                                                                                                         aaCTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCAtt           <  7:153576/149‑1 (MQ=255)                                                                                                                              gCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATgg                                >  6:258078/1‑123 (MQ=255)                                                                                                                              gCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATgg                                <  5:258078/123‑1 (MQ=255)                                                                                                                                  gACGGCTGTGGTGGTAGACCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAgg  >  3:246256/1‑149 (MQ=255)                                                                                                                                   aCGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAg   <  2:118011/147‑1 (MQ=255)                                                                                                                                               gtAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCtga                                      >  7:54642/1‑100 (MQ=255)                                                                                                                                               gtAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCtga                                      <  8:54642/100‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                   CGAGAACCTGTCGAAGGCGTTGAAGGCTGACAGTGCCTCGAGTGTGTTCGGCGCGGTGGTCGGTGTACCGCCGGTGACCAGCTATGTGGAGAGTGCTGCGGGGGTTGCCGCAGGTGGCCGAACTGGCCTGACGGCTGTGGTGGTAGGCCTGCTGTTCATCGCCGCGATGTTCTTCGCGCCGCTGGCCGGGATGATTCCGGCCTATGCGACAGCAGGTGCACTGATCTACGTTGCGATGCTGATGATGGGCAGCATGGCGCACATCCATTGGGATGAGG  >  NC_002947/4875697‑4875974

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.