New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5174206 = | 54 (1.090) | 3 (0.060) | 3/244 | NT | 5.9% | coding (774/1689 nt) | fadD‑II | long‑chain‑fatty acid‑‑CoA ligase |
? | NC_002947 | 5174263 = | 45 (0.960) | coding (717/1689 nt) | fadD‑II | long‑chain‑fatty acid‑‑CoA ligase |
ACATCGCGGTGCTGCAGTACACCGGCGGCACCACCGGCCTGGCCAAGGGCGCCATGCTCACCCATGGCAACCTGGTGGCCAACATGCTGCAAGTGCTGGCCTGCTTCTCGCAGCACGGCCCCGATGGGCAGAAGCTGCTGAAGGACGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5174357‑5174206 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagCACTTGCAGCATGTTGGCCACCAGGTTGCCATGGGTGAGCATGGCGCCCTTGGCCAGGCCGGTGGTGCCGCCGGTGTACTGCAGCACCGCGATGTCATCGAGGTTCAGCGACACCGGTTTGGGCGACAGCCCGCGGCCCTCGCG > NC_002947/5174263‑5174406 ACATCGCGGTGCTGCAGTACACCGGCGGCACCACCGGCCTGGCCAAGGGCGCCATGCTCACCCATGGCAACCTGGTGGCCAACATGCTGCAAGTGCTGGCCTGCTTCTCGCAGCACGGCCCCGATGGGCAGAAGCTGCTGAAGGACGGC < 5:206551/149‑1 ACATCGCGGTGCTGCAGTACACCGGCGGCACCACCGGCCTGGCCAAGGGCGCCATGCTCACCCATGGCAACCTGGTGGCCAACATGCTGCAAGTGCTGGCCTGCTTCTCGCAGCACGGCCCCGATGGGCAGAAGCTGCTGAAGGACGGC < 8:51618/149‑1 TGCAAGTGCTGGCCTGCTTCTCGCAGCACGGCCCCGATGGGCAGAAGCTGCTGAAGGACGGCCAGCACTTGCAGCATGTTGGCCACCAGGTTGCCATGGGTGAGCATGGCGCCCTTGGCCAGGCCGGTGGTGCCGCCGGTGTACTGCAG > 1:179557/1‑149 GCCTGCTTCTCGCAGCACGGCCCCGATGGGCAGAAGCTGCTGAAGGACGGCCAGCACTTGCAGCATGTTGGCCACCAGGTTGCCATGGGTGAGCATGGCGCCCTTGGCCAGGCCGGTGGTGCCGCCGGTGTACTGCA < 7:236310/137‑1 GCCTGCTTCTCGCAGCACGGCCCCGATGGGCAGAAGCTGCTGAAGGACGGCCAGCACTTGCAGCATGTTGGCCACCAGGTTGCCATGGGTGAGCATGGCGCCCTTGGCCAGGCCGGTGGTGCCGCCGGTGTACTGCA > 8:236310/1‑137 GCCAGCACTTGCAGCATGTTGGCCACCAGGTTGCCATGGGTGAGCATGGCGCCCTTGGCCAGGCCGGTGGTGCCGCCGGTGTACTGCAGCACCGCGATGTCATCGAGGTTCAGCGACACCGGTTTGGGCGACAGCCCGCGGCCCTCGCG > 4:139916/1‑149 ACATCGCGGTGCTGCAGTACACCGGCGGCACCACCGGCCTGGCCAAGGGCGCCATGCTCACCCATGGCAACCTGGTGGCCAACATGCTGCAAGTGCTGGCCTGCTTCTCGCAGCACGGCCCCGATGGGCAGAAGCTGCTGAAGGACGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5174357‑5174206 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagCACTTGCAGCATGTTGGCCACCAGGTTGCCATGGGTGAGCATGGCGCCCTTGGCCAGGCCGGTGGTGCCGCCGGTGTACTGCAGCACCGCGATGTCATCGAGGTTCAGCGACACCGGTTTGGGCGACAGCCCGCGGCCCTCGCG > NC_002947/5174263‑5174406 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |