| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5493020 | 29 (0.590) | 5 (0.110) | 4/238 | NT | 15.4% | coding (996/1698 nt) | cobJ | precorrin‑3B C17‑methyltransferase |
| ? | NC_002947 | = 5493054 | 28 (0.610) | coding (962/1698 nt) | cobJ | precorrin‑3B C17‑methyltransferase | |||||
CGGCCTTGGGCCGCCAGTTCGAAGGCATGTCGGGCGCGCTGCATCTCTTCGCGGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5492865‑5493020‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccttgGCCCTGGTGCGGCGGAACTGATGGTGCCGGCGGTCAAGGCCGAACTTGCGCAGGCCGAAGATGTGCTCGGTTACGAAACTTACGTGCGCATGGCTGGCCCGTTCCGCGGCGACCAGGTGCTGCACTGCACCGACAACCGCG < NC_002947/5493054‑5492914 CGGCCTTGGGCCGCCAGTTCGAAGGCATGTCGGGCGCGCTGCATCTCTTCGCGGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTC < 3:214446/149‑1 GCCTTGGGCCGCCAGTTCGAAGGCATGTCGGGCGCGCTGCATCTCTTCGCGGTTGTCGGTGCAGTGCAGCACTTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGG < 4:179086/149‑1 GCCTTGGGCCGCCAGTTCGAAGGCATGTCGGGCGCGCTGCATCTCTTCGCGGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGG < 5:318212/149‑1 CTTGGGCCGCCAGTTCGAAGGCATGTCGGGCGCGCTGCATCTCTTCGCGGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCC > 3:226635/1‑149 CTTCGCGGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGGCCCTGGTGCGGCGGAACTGATGGTGCCGGCGGTCAAGG > 4:120817/1‑149 AGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGGCCCTGGTGCGGCGGAACTGATGGTGCCGGCGGTCAAGGC > 5:34528/1‑132 AGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGGCCCTGGTGCGGCGGAACTGATGGTGCCGGCGGTCAAGGC < 6:34528/132‑1 CCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGGCCCTGGTGCGGCGGAACTGATGGTGCCGGCGGTC < 2:150829/98‑1 CCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGGCCCTGGTGCGGCGGAACTGATGGTGCCGGCGGTC < 6:223885/98‑1 CGGCCTTGGCCCTGGTGCGGCGGAACTGATGGTGCCGGCGGTCAAGGCCGAACTTGCGCAGGCCGAAGATGTGCTCGGTTACGAAACTTACGTGCGCATGGCTGGCCCGTTCCGCGGCGACCAGGTGCTGCACTGCACCGACAACCGC > 5:76238/1‑148 GCCTTGGCCCTGGTGCGGCGGAACTGATGGTGCCGGCGGTCAAGGCCGAACTTGCGCAGGCCGAAGATGTGCTCGGTTACGAAACTTACGTGCGCATGGCTGGCCCGTTCCGCGGCGACCAGGTGCTGCACTGCACCGACAACCGCG > 4:308225/1‑147 CGGCCTTGGGCCGCCAGTTCGAAGGCATGTCGGGCGCGCTGCATCTCTTCGCGGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5492865‑5493020‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccttgGCCCTGGTGCGGCGGAACTGATGGTGCCGGCGGTCAAGGCCGAACTTGCGCAGGCCGAAGATGTGCTCGGTTACGAAACTTACGTGCGCATGGCTGGCCCGTTCCGCGGCGACCAGGTGCTGCACTGCACCGACAACCGCG < NC_002947/5493054‑5492914 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |