New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5493020	29 (0.590)	5 (0.110)	4/238	NT	15.4%	coding (996/1698 nt)	cobJ	precorrin‑3B C17‑methyltransferase
	?	NC_002947	= 5493054	28 (0.610)					coding (962/1698 nt)	cobJ	precorrin‑3B C17‑methyltransferase

AGTTCGAAGGCATGTCGGGCGCGCTGCATCTCTTCGCGGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTCCAAGCGCTATCAACTCGCTATCG  >  NC_002947/5492880‑5493164                                                                                                                                             |                                                                                                                                                 aGTTCGAAGGCATGTCGGGCGCGCTGCATCTCTTCGCGGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCgg                                                                                                                                          >  6:76238/1‑149 (MQ=255)                       gcTGCATCTCTTCGCGGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCAc                                                                                                                      >  1:247854/1‑147 (MQ=255)                       gcTGCATCTCTTCGCGGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCAc                                                                                                                      >  3:308225/1‑147 (MQ=255)                         tGCATCTCTTCGCGGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAgg                                                                                                                  >  3:27433/1‑149 (MQ=255)                           cATCTCTTCGCGGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAggg                                                                                                                 <  7:202334/148‑1 (MQ=255)                           cATCTCTTCGCGGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAgg                                                                                                                  <  3:271585/147‑1 (MQ=255)                                ctTCGCGGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGgccctggtgcggcggaactgatggtgccggcggtcaagg                                                                                                           >  4:120817‑M1/1‑110 (MQ=255)                                   cgcgGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCcaaggc                                                                                                          >  4:308225‑M2/1‑141 (MQ=255)                                    gcgGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCcaaggccg                                                                                                        >  5:76238‑M2/1‑140 (MQ=255)                                             ggTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGc                                                                                                >  3:217998/1‑147 (MQ=255)                                                gcagtgcagCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGc                                                                                           >  5:122051/1‑149 (MQ=255)                                                 cagtgcagCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGc                                                                                           <  4:27433/148‑1 (MQ=255)                                                  agtgcagCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGgccctggtgcggcggaactgatggtgccggcggtcaaggc                                                                                                          >  5:34528‑M1/1‑92 (MQ=255)                                                  agtgcagCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGgccctggtgcggcggaactgatggtgccggcggtcaaggc                                                                                                          <  6:34528‑M1/132‑41 (MQ=255)                                                                    cgcgGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCTTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGAcc                                                                       >  4:56741/1‑149 (MQ=255)                                                                             ggCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACg                                                              <  7:227370/149‑1 (MQ=255)                                                                              gccagccaTGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGt                                                             >  6:229499/1‑149 (MQ=255)                                                                               ccagccaTGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGgccctggtgcggcggaactgatggtgccggcggtc                                                                                                               <  2:150829‑M1/98‑36 (MQ=255)                                                                               ccagccaTGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGgccctggtgcggcggaactgatggtgccggcggtc                                                                                                               <  6:223885‑M1/98‑36 (MQ=255)                                                                                 agccaTGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGa                                                          <  4:217998/149‑1 (MQ=255)                                                                                     aTGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCgg                                                      >  6:150242/1‑149 (MQ=255)                                                                                        cgcACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCgggg                                                    <  5:150242/148‑1 (MQ=255)                                                                                            cGTAAGTTTCGTAACCGAGCACATCTTCGGCTTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGAc                                               <  3:56741/149‑1 (MQ=255)                                                                                                       tAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACCTCGACCGGGGCAGCAGCCACcgcgcc                                    >  4:222107/1‑147 (MQ=255)                                                                                                        aaCCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGAcc                                   >  8:139411/1‑149 (MQ=255)                                                                                                            gAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGa                               <  5:229499/149‑1 (MQ=255)                                                                                                                accccTTCCGCCTGCGCCAGGTCCGCCTTGACCGCCGGCACCATCAGCTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTtc                           <  4:226635/145‑1 (MQ=255)                                                                                                                  aTCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTtctc                         <  3:222107/149‑1 (MQ=255)                                                                                                                     ttCGGCCTGCTCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTcc                        >  1:22683/1‑147 (MQ=255)                                                                                                                       cGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGTCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTcc                        <  2:247854/145‑1 (MQ=255)                                                                                                                            tGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACTGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTCCAAGCGCTAt               >  4:251179/1‑149 (MQ=255)                                                                                                                               gcAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTCCAAGCGCTATCaa            >  3:48222/1‑149 (MQ=255)                                                                                                                                cAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTCCAAGCGCTATCAAc           <  2:22683/149‑1 (MQ=255)                                                                                                                                   gTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTCCAAGCGCTATCAACTCg        >  7:263854/1‑149 (MQ=255)                                                                                                                                    ttCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGAAGCCACCGCGACCACGACTTCTCCAAGCGCTATCAACTCg        >  8:70296/1‑148 (MQ=255)                                                                                                                                      cGGCCTTGgccctggtgcggcggaactgatggtgccggcggtcaaggccgaacttgcgcaggccgaagatgtgctcggttacgaaacttacgtgcgcatggctggcccgttccgcggcgaccaggtgctgcactgcaccgacaaccgc      >  5:76238‑M1/1‑8 (MQ=255)                                                                                                                                        gCCTTGgccctggtgcggcggaactgatggtgccggcggtcaaggccgaacttgcgcaggccgaagatgtgctcggttacgaaacttacgtgcgcatggctggcccgttccgcggcgaccaggtgctgcactgcaccgacaaccgcg     >  4:308225‑M1/1‑6 (MQ=255)                                                                                                                                        gCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCcaaggccgaacttgcgcaggccgaagatgtgctcggttacgaaacttacgtgcgcatggctggcccgttccgcggcgaccaggtgctgcact                    >  5:34528‑M2/1‑40 (MQ=255)                                                                                                                                        gCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCcaaggccgaacttgcgcaggccgaagatgtgctcggttacgaaacttacgtgcgcatggctggcccgttccgcggcgaccaggtgctgcact                    <  6:34528‑M2/132‑93 (MQ=255)                                                                                                                                        gCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTCCAAGCGCTATCAACTCGCTATc   >  8:118919/1‑149 (MQ=255)                                                                                                                                         ccTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCcaaggccgaacttgcgcaggccgaagatgtgctcggttacgaaacttacgtgcgcatggctggcccgttccgcggcgaccaggtgctgcactgcaccgacaaccgcgaag  >  4:120817‑M2/1‑39 (MQ=255)                                                                                                                                             gACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCcaaggccgaacttgcgcaggccgaagatgtgctcggttacgaaacttacgtgcgcatggctgg                                                 <  2:150829‑M2/98‑64 (MQ=255)                                                                                                                                             gACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCcaaggccgaacttgcgcaggccgaagatgtgctcggttacgaaacttacgtgcgcatggctgg                                                 <  6:223885‑M2/98‑64 (MQ=255)                                                                                                                                             |                                                                                                                                                 AGTTCGAAGGCATGTCGGGCGCGCTGCATCTCTTCGCGGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTCCAAGCGCTATCAACTCGCTATCG  >  NC_002947/5492880‑5493164

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.