New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5493020	29 (0.590)	5 (0.110)	4/238	NT	15.4%	coding (996/1698 nt)	cobJ	precorrin‑3B C17‑methyltransferase
	?	NC_002947	= 5493054	28 (0.610)					coding (962/1698 nt)	cobJ	precorrin‑3B C17‑methyltransferase

CGCGGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTCCAAGCGCTATCAACTCGCTATCGGGCACCGCCGCAGCGACCATGCTGGCCACATCGCCTGG  >  NC_002947/5492914‑5493202                                                                                                                                             |                                                                                                                                                     cgcgGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCcaaggc                                                                                                                                                >  4:308225‑M2/1‑141 (MQ=255)  gcgGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCcaaggccg                                                                                                                                              >  5:76238‑M2/1‑140 (MQ=255)           ggTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGc                                                                                                                                      >  3:217998/1‑147 (MQ=255)              gcagtgcagCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGc                                                                                                                                 >  5:122051/1‑149 (MQ=255)               cagtgcagCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGc                                                                                                                                 <  4:27433/148‑1 (MQ=255)                                  cgcgGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCTTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGAcc                                                                                                             >  4:56741/1‑149 (MQ=255)                                           ggCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACg                                                                                                    <  7:227370/149‑1 (MQ=255)                                            gccagccaTGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGt                                                                                                   >  6:229499/1‑149 (MQ=255)                                               agccaTGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGa                                                                                                <  4:217998/149‑1 (MQ=255)                                                   aTGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCgg                                                                                            >  6:150242/1‑149 (MQ=255)                                                      cgcACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCgggg                                                                                          <  5:150242/148‑1 (MQ=255)                                                          cGTAAGTTTCGTAACCGAGCACATCTTCGGCTTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGAc                                                                                     <  3:56741/149‑1 (MQ=255)                                                                     tAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACCTCGACCGGGGCAGCAGCCACcgcgcc                                                                          >  4:222107/1‑147 (MQ=255)                                                                      aaCCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGAcc                                                                         >  8:139411/1‑149 (MQ=255)                                                                          gAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGa                                                                     <  5:229499/149‑1 (MQ=255)                                                                              accccTTCCGCCTGCGCCAGGTCCGCCTTGACCGCCGGCACCATCAGCTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTtc                                                                 <  4:226635/145‑1 (MQ=255)                                                                                aTCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTtctc                                                               <  3:222107/149‑1 (MQ=255)                                                                                   ttCGGCCTGCTCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTcc                                                              >  1:22683/1‑147 (MQ=255)                                                                                     cGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGTCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTcc                                                              <  2:247854/145‑1 (MQ=255)                                                                                          tGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACTGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTCCAAGCGCTAt                                                     >  4:251179/1‑149 (MQ=255)                                                                                             gcAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTCCAAGCGCTATCaa                                                  >  3:48222/1‑149 (MQ=255)                                                                                              cAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTCCAAGCGCTATCAAc                                                 <  2:22683/149‑1 (MQ=255)                                                                                                 gTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTCCAAGCGCTATCAACTCg                                              >  7:263854/1‑149 (MQ=255)                                                                                                  ttCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGAAGCCACCGCGACCACGACTTCTCCAAGCGCTATCAACTCg                                              >  8:70296/1‑148 (MQ=255)                                                                                                      gCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCcaaggccgaacttgcgcaggccgaagatgtgctcggttacgaaacttacgtgcgcatggctggcccgttccgcggcgaccaggtgctgcact                                                          >  5:34528‑M2/1‑40 (MQ=255)                                                                                                      gCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCcaaggccgaacttgcgcaggccgaagatgtgctcggttacgaaacttacgtgcgcatggctggcccgttccgcggcgaccaggtgctgcact                                                          <  6:34528‑M2/132‑93 (MQ=255)                                                                                                      gCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTCCAAGCGCTATCAACTCGCTATc                                         >  8:118919/1‑149 (MQ=255)                                                                                                       ccTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCcaaggccgaacttgcgcaggccgaagatgtgctcggttacgaaacttacgtgcgcatggctggcccgttccgcggcgaccaggtgctgcactgcaccgacaaccgcgaag                                        >  4:120817‑M2/1‑39 (MQ=255)                                                                                                           gACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCcaaggccgaacttgcgcaggccgaagatgtgctcggttacgaaacttacgtgcgcatggctgg                                                                                       <  6:223885‑M2/98‑64 (MQ=255)                                                                                                           gACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCcaaggccgaacttgcgcaggccgaagatgtgctcggttacgaaacttacgtgcgcatggctgg                                                                                       <  2:150829‑M2/98‑64 (MQ=255)                                                                                                                     aCCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTCCAAGCGCTATCAACTCGCTATCGGGCACCGCCGCAGc                          >  5:180055/1‑149 (MQ=255)                                                                                                                       cATGAGTTCCGCCGCACCAGGGACAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTCAACGCGCTATCAACTCGCTTTCGGGCACCGCCGCAGCGa                        >  8:140684/1‑149 (MQ=255)                                                                                                                             ttCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTCCAAGCGCTATCAACTCGCTATCGGGCACCGCCGCAGCGACCATGc                  <  8:263854/149‑1 (MQ=255)                                                                                                                               ccgccgCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTCCAAGCGCTATCAACTCGCTATCGGGCACCGCCGCAGCGACCATGCTg                >  3:117643/1‑149 (MQ=255)                                                                                                                                cgccgcACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTCCAAGCGCTATCAACTCGCTATCGGGCACCGCCGCAGCGACCATGCTg                <  6:122051/148‑1 (MQ=255)                                                                                                                                             ccAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTCCAAGCGCTATCAACTCGCTATCGGGCACCGCCGCAGCGACCATGCTGGCCACATCGCCTgg  <  7:139411/149‑1 (MQ=255)                                                                                                                                             |                                                                                                                                                     CGCGGTTGTCGGTGCAGTGCAGCACCTGGTCGCCGCGGAACGGGCCAGCCATGCGCACGTAAGTTTCGTAACCGAGCACATCTTCGGCCTGCGCAAGTTCGGCCTTGACCGCCGGCACCATCAGTTCCGCCGCACCAGGGCCAAGGCCGATGACCGCCAGGCGACCGCGACGGCGGCCGACCTGCGCTACGTCGACCGGGGCAGACGCCACCGCGACCACGACTTCTCCAAGCGCTATCAACTCGCTATCGGGCACCGCCGCAGCGACCATGCTGGCCACATCGCCTGG  >  NC_002947/5492914‑5493202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.