New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 60129	54 (1.090)	4 (0.090)	4/240	NT	7.5%	coding (480/1293 nt)	PP_0051	sigma‑54 dependent transcriptional regulator
	?	NC_002947	= 60157	48 (1.040)					coding (452/1293 nt)	PP_0051	sigma‑54 dependent transcriptional regulator

TCATAGCCGAACAGTTCACTCTCGAACAACGACTCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCCTTGCTCCTGAGGCTGCGCCGAGGCGAGGGTGATGGTGGTGAGGCGTTCGACAAAGGCCACTACCTTG  >  NC_002947/59986‑60276                                                                                                                                                 |                                                                                                                                                    tcATAGCCGAACAGTTCACTCTCGAACAACGACTCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAacac                                                                                                                                                >  7:125688/1‑149 (MQ=255)  cATAGCCGAACAGTTCACTCTCGAACAACGACTCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACAGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACAcc                                                                                                                                               >  4:63052/1‑149 (MQ=255)   aTAGCCGAACAGTTCACTCTCGAACAACGACTCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCg                                                                                                                                              <  7:194070/149‑1 (MQ=255)    tAGCCGAACAGTTCACTCTCGAACAACGACTCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCgg                                                                                                                                             >  1:80056/1‑149 (MQ=255)      gCCGAACAGTTCACTCTCGAACAACGACTCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGa                                                                                                                                           <  2:177562/149‑1 (MQ=255)      gCCGAACAGTTCACTCTCGAACAACGACTCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGa                                                                                                                                           <  2:80056/149‑1 (MQ=255)         gAACAGTTCACTCTCGAACAACGACTCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCg                                                                                                                                              <  6:313453/143‑1 (MQ=255)         gAACAGTTCACTCTCGAACAACGACTCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCg                                                                                                                                              >  5:313453/1‑143 (MQ=255)          aaCAGTTCACTCTCGAACAACGACTCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTg                                                                                                                                       >  4:142534/1‑149 (MQ=255)          aaCAGTTCACTCTCGAACAACGACTCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTg                                                                                                                                       >  3:311121/1‑149 (MQ=255)             aGTTCACTCTCGAACAACGACTCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACAGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTgcgc                                                                                                                                    <  3:63052/149‑1 (MQ=255)               ttCACTCTCGAACAACGACTCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCg                                                                                                                                  >  7:28925/1‑149 (MQ=255)                    tctcGAACAACGACTCGGTCAGGCCGGTGCAGTCGACCATCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGcc                                                                                                                             >  1:289653/1‑149 (MQ=255)                    tctcGAACAACGACTCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGcc                                                                                                                             >  1:13100/1‑149 (MQ=255)                        gAACAACGACTCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCCAAGGGGCTCCCCATTTGCACTGCCCGGGCGACCAGAACCTTGCCGGTCCCCCCCACCCCCTGCAGCAACACCGGGAAATCCGCCGGTGcccaa                                                                                                                          >  1:245973/1‑146 (MQ=255)                          acaacGACTCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACgc                                                                                                                       <  2:268620‑M2/149‑3 (MQ=255)                            aacGACTCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACgctg                                                                                                                     <  1:251167‑M2/149‑5 (MQ=255)                            aacGACTCGGTCAGGCCGGTGCAGTCGACAAACACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGAACGGGCGAACAGCTCCTTGCCGGTCACCGACTCCACCTGCAGCAACACCGGGATCTTCGCCGGTGCCGCACgctg                                                                                                                     <  4:58707‑M2/149‑5 (MQ=255)                              cGACTCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACgctg                                                                                                                     <  6:323738‑M2/147‑5 (MQ=255)                                aCTCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTCCGCCGGTGCCGCACgctgcagg                                                                                                                 <  8:21040‑M2/149‑9 (MQ=255)                                  tCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCt                                                                                                               >  4:147012/1‑149 (MQ=255)                                      tCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGcc                                                                                                           >  5:223898/1‑149 (MQ=255)                                        aGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCgtgcggcaccggcgcagatcccggtgttgctgcag                                                                                                                  <  7:103766‑M1/140‑36 (MQ=255)                                        aGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCgtgcggcaccggcgcagatcccggtgttgctgcag                                                                                                                  >  8:103766‑M1/1‑105 (MQ=255)                                               tGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGcc                                                                                                  <  2:13100/149‑1 (MQ=255)                                                 cAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCt                                                                                                 <  2:245973/148‑1 (MQ=255)                                                  attCGACCACCACCATTGGGCCGTTGTCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTTCCGTTCCCCGACTCCCACTGCAGCAACACCTGTATCTGCGCAGTTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCtt                                                                                                <  3:58707/146‑1 (MQ=255)                                                   gTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGa                                                                                              <  8:125688/149‑1 (MQ=255)                                                    tCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGaa                                                                                             <  2:55245/149‑1 (MQ=255)                                                    gcGACCACCCCCAGTGGGCCGTTGGGCC‑CGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGaa                                                                                             <  6:231350/148‑1 (MQ=255)                                                     cGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAg                                                                                            >  5:172739/1‑149 (MQ=255)                                                     cGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAg                                                                                            <  6:223898/149‑1 (MQ=255)                                                        ccaccaccaGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGtt                                                                                         >  2:88316/1‑149 (MQ=255)                                                          accaccaGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAAGTTgg                                                                                       >  2:82771/1‑149 (MQ=255)                                                           ccaccaGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGgc                                                                                      >  2:18060/1‑149 (MQ=255)                                                           ccaccaGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGgc                                                                                      >  5:307304/1‑149 (MQ=255)                                                            caccaGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCgtgcggcaccggcgcagatcccggtgttgctgcaggg                                                                                                                <  3:262452‑M1/122‑38 (MQ=255)                                                            caccaGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCgtgcggcaccggcgcagatcccggtgttgctgcaggg                                                                                                                >  4:262452‑M1/1‑85 (MQ=255)                                                                 gtcggCCGTGGGCCC‑TGGGGCTGCCCATGGGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGAGCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCgg                                                                                <  3:256011/146‑1 (MQ=255)                                                                  tGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAg                                                                                            >  6:214365/1‑136 (MQ=255)                                                                  tGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAg                                                                                            <  5:214365/136‑1 (MQ=255)                                                                     gCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGa                                                                            <  8:28925/149‑1 (MQ=255)                                                                           ggCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAAc                                                                       <  3:147012/148‑1 (MQ=255)                                                                             ccc‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAAcctt                                                                    >  8:161157/1‑147 (MQ=255)                                                                                   gggCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAAccttcaa                                                                 <  7:161157/147‑6 (MQ=255)                                                                                    ggCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCCTTGCTcc                                                              >  6:157507/1‑149 (MQ=255)                                                                                         cccATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCCTTGCTCCTGa                                                           <  6:307304/147‑1 (MQ=255)                                                                                         cccATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCCTTGCTCCTGAg                                                          <  3:55075/148‑1 (MQ=255)                                                                                         cccATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCCTTGCTCCTGAg                                                          >  4:55075/1‑148 (MQ=255)                                                                                          ccATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCCTTGCTCCTGAGGc                                                        >  6:217092/1‑149 (MQ=255)                                                                                               tgcactgcacGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCCTTGCTCCTGAGGCTgcg                                                    <  1:88316/148‑1 (MQ=255)                                                                                                  actgcacGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCCTTGCTCCTGAGGCTGCGCcga                                                <  2:251167/149‑1 (MQ=255)                                                                                                    tgcacGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCCTTGCTCCTGAGGCTGCGCcgagg                                              >  2:27567/1‑149 (MQ=255)                                                                                                       acGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCCTTGCTCCTGAGGCTGCGCcgaggcga                                           <  5:323738/149‑1 (MQ=255)                                                                                                       acGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCCTTGCTCCTGAGGCTGCGCcgaggcga                                           <  5:217092/149‑1 (MQ=255)                                                                                                             gAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCCTTGCTCCTGAGGCTGCGCCGAGGCGAGGGTGa                                     <  1:27567/149‑1 (MQ=255)                                                                                                                cAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCCTTGCTCCTGAGGCTGCGCCGAGGCGAGGGTGAtgg                                  >  7:27160/1‑149 (MQ=255)                                                                                                                  gCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCCTTGCTCCTGAGGCTGCGCCGAGGCGAGGGTGAtggtg                                <  5:157507/149‑1 (MQ=255)                                                                                                                    tCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCCTTGCTCCTGAGGCTGCGCCGAGGCGAGGGTGATggtggt                              >  5:212261/1‑149 (MQ=255)                                                                                                                            ggTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCTTTGCTCCTGAGGCTGCGCCGAGGCGAGGGTGATGGTGGTGAGGCGtt                      <  1:268620/149‑1 (MQ=255)                                                                                                                                   gACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGGGCGGCCGACCAACCCTTGCTCCTGAGGCTGCGCCGAGGCGAGGGTGATGGTGGTGAGGCGTTCGACaaa               <  7:21040/149‑1 (MQ=255)                                                                                                                                      tCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCCTTGCTCCTGAGGCTGCGCCGAGGCGAGGGTGATGGTGGTGAGGCGTTCGACAAAGGc            >  5:266454/1‑149 (MQ=255)                                                                                                                                         cccTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACgctgcagggggagtcggggaccggcaaggagctgttcgcccgtgcagtgcacatgggcagccccagggccaacggcccactggtg                                    >  4:262452‑M2/1‑37 (MQ=255)                                                                                                                                         cccTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACgctgcagggggagtcggggaccggcaaggagctgttcgcccgtgcagtgcacatgggcagccccagggccaacggcccactggtg                                    <  3:262452‑M2/122‑86 (MQ=255)                                                                                                                                         cccTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCCTTGCTCCTGAGGCTGCGCCGAGGCGAGGGTGATGGTGGTGAGGCGTTCGACAAAGGCCAc         <  6:212261/149‑1 (MQ=255)                                                                                                                                          ccTGCAGCgtgcggcaccggcggagatcccggtgttgctgcagggggagtcggggaccggcaaggagctgttcgcccgtgcagtgcacatgggcagccccagggccaacggcccactggtggtggtcgactgcaccggcctgaccgagt        <  8:21040‑M1/149‑142 (MQ=255)                                                                                                                                          ccTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCCTTGCTCCTGAGGCTGCGCCGAGGCGAGGGTGATGGTGGTGAGGCGTTCGACAAAGGCCAc         >  7:280866/1‑148 (MQ=255)                                                                                                                                           cTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACgctgcagggggagtcggggaccggcaaggagctgttcgcccgtgcagtgcacatgggcagccccagggccaacggcccactggtggtggtcgactgcaccggcct                <  7:103766‑M2/140‑106 (MQ=255)                                                                                                                                           cTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACgctgcagggggagtcggggaccggcaaggagctgttcgcccgtgcagtgcacatgggcagccccagggccaacggcccactggtggtggtcgactgcaccggcct                >  8:103766‑M2/1‑35 (MQ=255)                                                                                                                                              cAGCgtgcggcaccggcgcagatcccggtgttgctgcagggggagtcggggaccggcaaggagctgttcgcccgtgcagtgcacatgggcagccccagggccaacggcccactggtggtggtcgactgcaccggcctgaccgagtcgtt    <  1:251167‑M1/149‑146 (MQ=255)                                                                                                                                              cAGCgtgcggcaccggcgcagatcccggtgttgctgcagggggagtcggggaccggcaaggagctgttcgcccgtgcagtgcacatgggcagccccagggccaacggcccactggtggtggtcgactgcaccggcctgaccgagtcg      <  6:323738‑M1/147‑144 (MQ=255)                                                                                                                                              cAGCgtgcggcaccggcgaagatcccggtgttgctgcaggtggagtcggtgaccggcaaggagctgttcgcccgttcagtgcacatgggcagccccagggccaacggcccactggtgtttgtcgactgcaccggcctgaccgagtcgtt    <  4:58707‑M1/149‑146 (MQ=255)                                                                                                                                               agcaACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCCTTGCTCCTGAGGCTGCGCCGAGGCGAGGGTGATGGTGGTGAGGCGTTCGACAAAGGCCACTACCtt   >  3:294003/1‑149 (MQ=255)                                                                                                                                                gCgtgcggcaccggcgcagatcccggtgttgctgcagggggagtcggggaccggcaaggagctgttcgcccgtgcagtgcacatgggcagccccagggccaacggcccactggtggtggtcgactgcaccggcctgaccgagtcgttgt  <  2:268620‑M1/149‑148 (MQ=255)                                                                                                                                                 |                                                                                                                                                    TCATAGCCGAACAGTTCACTCTCGAACAACGACTCGGTCAGGCCGGTGCAGTCGACCACCACCAGTGGGCCGTTGGCCC‑TGGGGCTGCCCATGTGCACTGCACGGGCGAACAGCTCCTTGCCGGTCCCCGACTCCCCCTGCAGCAACACCGGGATCTGCGCCGGTGCCGCACGCTGCAGGCTGGCCAGCGCGGCCTTGAAGGTTGGCGCGCGGCCGACCAACCCTTGCTCCTGAGGCTGCGCCGAGGCGAGGGTGATGGTGGTGAGGCGTTCGACAAAGGCCACTACCTTG  >  NC_002947/59986‑60276

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.