New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1371742	49 (0.990)	3 (0.070)	3/234	NT	6.6%	intergenic (+15/+57)	PP_1196/rimO	hypothetical protein/ribosomal protein S12 methylthiotransferase
	?	NC_002947	= 1371771	40 (0.890)					intergenic (+44/+28)	PP_1196/rimO	hypothetical protein/ribosomal protein S12 methylthiotransferase

ATCAAGGAGCTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATC  >  NC_002947/1371596‑1371888                                                                                                                                                   |                                                                                                                                                    aTCAAGGAGCTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTgcgc                                                                                                                                                   >  6:68017/1‑149 (MQ=255)     aGGAGCTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGt                                                                                                                                               >  1:258582/1‑149 (MQ=255)      ggAGCTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGt                                                                                                                                               >  3:118456/1‑148 (MQ=255)      ggAGCTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGt                                                                                                                                               >  6:141818/1‑148 (MQ=255)          cTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTc                                                                                                                                          <  4:118456/149‑1 (MQ=255)               ccTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTAt                                                                                                                                     >  7:248971/1‑149 (MQ=255)               ccTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTAt                                                                                                                                     >  6:229304/1‑149 (MQ=255)                   ttCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATgg                                                                                                                                   <  6:294725/147‑1 (MQ=255)                       tCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACg                                                                                                                             >  7:105807/1‑149 (MQ=255)                       tCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGAGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACg                                                                                                                             >  1:8002/1‑149 (MQ=255)                       tCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAAGAATGGCTGATGCAGAGTAACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACg                                                                                                                             >  1:260751/1‑149 (MQ=255)                           ccACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTAt                                                                                                                                     >  4:143070/1‑137 (MQ=255)                           ccACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTAt                                                                                                                                     <  3:143070/137‑1 (MQ=255)                           ccACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCgg                                                                                                                        <  8:248971/149‑1 (MQ=255)                           ccACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCgg                                                                                                                        <  8:105807/149‑1 (MQ=255)                            cacaAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCggg                                                                                                                       >  6:271474/1‑149 (MQ=255)                                  cTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCcccggcgttctccatagggaatgaccggcgcaggg                                                                                                                  <  2:97152‑M1/149‑36 (MQ=255)                                       cccGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGgcaggggcttt                                                                                                            <  3:33511‑M2/149‑12 (MQ=255)                                         cGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCcccggcgttctccatagggaatgaccggcgcagg                                                                                                                   <  1:195758‑M1/141‑35 (MQ=255)                                         cGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCcccggcgttctccatagggaatgaccggcgcagg                                                                                                                   >  2:195758‑M1/1‑107 (MQ=255)                                         cGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCGGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTg                                                                                                           >  3:170580/1‑148 (MQ=255)                                           cAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAg                                                                                                        <  1:26434/149‑1 (MQ=255)                                                         aCTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGtttt                                                                                          <  5:271474/149‑1 (MQ=255)                                                         aCTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGtttt                                                                                          <  2:258582/149‑1 (MQ=255)                                                               tGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGa                                                                                       <  2:260751/146‑1 (MQ=255)                                                               tGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATgg                                                                                    <  5:229304/149‑1 (MQ=255)                                                               tGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATgg                                                                                    >  4:95109/1‑149 (MQ=255)                                                                  aGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGtt                                                                                 <  5:68017/149‑1 (MQ=255)                                                                      aaaGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGgcagggg                                                                                                                <  8:26372‑M2/114‑8 (MQ=255)                                                                      aaaGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGgcagggg                                                                                                                >  7:26372‑M2/1‑107 (MQ=255)                                                                      aaaGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGATTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCACGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGc                                                                             >  1:232223/1‑149 (MQ=255)                                                                       aaGGCTTCTCGGATGCCAGCCCGGATGCAGAGGGCGGCCTGATGCTGTTACACACGTACTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATg                                                                                                                                    >  5:168879/1‑94 (MQ=255)                                                                           cTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCcaca                                                                        <  3:95109/149‑1 (MQ=255)                                                                            ttCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTGACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACAt                                                                       >  1:223415/1‑149 (MQ=255)                                                                                cGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCg                                                                   >  2:41920/1‑149 (MQ=255)                                                                                                 gCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATccac                                                  >  5:210480/1‑149 (MQ=255)                                                                                                    gAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCcaccac                                               <  2:8002/149‑1 (MQ=255)                                                                                                               gATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCa                                    >  7:187449/1‑149 (MQ=255)                                                                                                                  gCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACtt                                 >  6:33851/1‑149 (MQ=255)                                                                                                                     gTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCa                                                                               >  1:207438/1‑100 (MQ=255)                                                                                                                     gTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCa                                                                               <  2:207438/100‑1 (MQ=255)                                                                                                                      tttCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCACGGGCTTTGCAGCCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGACGGCATCCACCACACGGCAACGCACTTTgac                             >  2:55955/1‑147 (MQ=255)                                                                                                                          acacGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCt                         >  1:84063/1‑149 (MQ=255)                                                                                                                               ttCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCtt                    <  4:33511/149‑1 (MQ=255)                                                                                                                               ttCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCAGGCtt                    >  5:319557/1‑149 (MQ=255)                                                                                                                                      aaaaaaGCCCCTGCGCCGGTCATTCCGTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGaaa                >  1:4326/1‑146 (MQ=255)                                                                                                                                      aaaaaaGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACt                                  >  2:55860/1‑128 (MQ=255)                                                                                                                                      aaaaaaGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGaaa                <  2:4326/146‑1 (MQ=255)                                                                                                                                      aaaaaaGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCa             >  2:314759/1‑149 (MQ=255)                                                                                                                                        aaaaGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATg           <  8:187449/149‑1 (MQ=255)                                                                                                                                        aaaaGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATg           <  6:210480/149‑1 (MQ=255)                                                                                                                                         aaaGCCCCTGCcccggcgttctccatagggaatgaccggcgcaggggcttttttgtcagaacgtgtgaaacagcatcaggccgccctcggcatccgggctggcatccgagaagcctttgactgcatagagttggactttccactgcggg           <  3:33511‑M1/149‑139 (MQ=255)                                                                                                                                         aaaGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACtcgt                                                            <  4:244476/99‑1 (MQ=255)                                                                                                                                         aaaGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACtcgt                                                            >  3:244476/1‑99 (MQ=255)                                                                                                                                         aaaGCCCCTGCCCCGG‑CGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATgg          >  3:143880/1‑149 (MQ=25)                                                                                                                                           aGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGgcagg                                                                                                                  >  2:46696‑M2/1‑38 (MQ=255)                                                                                                                                           aGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGgcagg                                                                                                                  <  1:46696‑M2/43‑6 (MQ=255)                                                                                                                                           aGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTc        >  8:155074/1‑149 (MQ=255)                                                                                                                                             ccccTGCcccggcgttctccatagggaatgaccggcgcaggggcttttttgtcagaacgtgtgaaacagcatcaggccgccctcggcatccgggctggcatccgagaagccttt                                          >  7:26372‑M1/1‑7 (MQ=255)                                                                                                                                             ccccTGCcccggcgttctccatagggaatgaccggcgcaggggcttttttgtcagaacgtgtgaaacagcatcaggccgccctcggcatccgggctggcatccgagaagccttt                                          <  8:26372‑M1/114‑108 (MQ=255)                                                                                                                                              cccTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGgcaggggcttttttgtcagaacgtgtgaaacagcatcaggccgccctcggcatccgggctggcatccgagaagcctttgactgcatagagttggactttccactgcgggttgag     <  2:97152‑M2/149‑115 (MQ=255)                                                                                                                                              cccTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGc      >  5:273086/1‑148 (MQ=255)                                                                                                                                               ccTGCcccggcgttctccatagggaatgaccggcgcaggggct                                                                                                               >  2:46696‑M1/1‑5 (MQ=255)                                                                                                                                               ccTGCcccggcgttctccatagggaatgaccggcgcaggggct                                                                                                               <  1:46696‑M1/43‑39 (MQ=255)                                                                                                                                               ccTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGgcaggggcttttttgtcagaacgtgtgaaacagcatcaggccgccctcggcatccgggctggcatccgagaagcctttgactgcatagagttggactttccactgcg            >  2:195758‑M2/1‑34 (MQ=255)                                                                                                                                               ccTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGgcaggggcttttttgtcagaacgtgtgaaacagcatcaggccgccctcggcatccgggctggcatccgagaagcctttgactgcatagagttggactttccactgcg            <  1:195758‑M2/141‑108 (MQ=255)                                                                                                                                                   cgcCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATc  <  4:170580/147‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                    ATCAAGGAGCTTACCCTGTTCCTCACCCACAAGCTCAACCCGCAGTGGAAAGTCCAACTCTATGCAGTCAAAGGCTTCTCGGATGCCAGCCCGGATGCCGAGGGCGGCCTGATGCTGTTTCACACGTTCTGACAAAAAAGCCCCTGCGCCGGTCATTCCCTATGGAGAACG‑CCGGGGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATC  >  NC_002947/1371596‑1371888

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.