New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3213874 =	38 (0.770)	3 (0.060)	3/246	NT	7.7%	coding (941/1137 nt)	mexC	multidrug RND transporter membrane fusion protein MexC
	?	NC_002947	3213958 =	35 (0.740)					coding (1025/1137 nt)	mexC	multidrug RND transporter membrane fusion protein MexC

CGGCCAGGTCATCCTGCGGGGGCGCTTCGACAACGCGGACGGCACGCTGCTGCCGGGCATGTATGTGCGCGTGCGCACGCCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCG  >  NC_002947/3213731‑3214008                                                                                                                                                |                                                                                                                                       cGGCCAGGTCATCCTGCGGGGGCGCTTCGACAACGCGGACGGCACGCTGCTGCCGGGCATGTATGTGCGCGTGCGCACGCCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAgg                                                                                                                                   >  2:102146/1‑149 (MQ=255)           aTCCTGCGGGGGCGCTTCGACAACGCGGACGGCACGCTGCTGCCGGGCATGTATGTGCGCGTGCGCACGCCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCtt                                                                                                                         <  6:290301/149‑1 (MQ=255)            tCCTGCGGGGGCGCTTCGACAACGCGGACGGCACGCTGCTGCCGGGCATGTATGTGCGCGTGCGCACGCCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTg                                                                                                                        <  6:243632/149‑1 (MQ=255)            tCCTGCGGGGGCGCTTCGACAACGCGGACGGCACGCTGCTGCCGGGCATGTATGTGCGCGTGCGCACGCCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTg                                                                                                                        <  6:116218/149‑1 (MQ=255)            tCCTGCGGGGGCGCTTCGACAACGCGGACGGCACGCTGCTGCCGGGCATGTATGTGCGCGTGCGCACGCCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTg                                                                                                                        <  3:111693/149‑1 (MQ=255)            tCCTGCGGGGGCGCTTCGACAACGCGGACGGCACGCTGCTGCCGGGCATGTATGTGCGCGTGCGCACGCCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTg                                                                                                                        <  4:269790/149‑1 (MQ=255)            tCCTGCGGGGGCGCTTCGACAACGCGGACGGCACGCTGCTGCCGGGCATGTATGTGCGCGTGCGCACGCCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTg                                                                                                                        >  4:170143/1‑149 (MQ=255)                       cgcTTCGACAACGCGGACGGCACGCTGCTGCCGGGCATGTATGTGCGCGTGCGCACGCCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCaa                                                                                                             <  3:170143/149‑1 (MQ=255)                              aCAACGCGGACGGCACGCTGCTGCCGGGCATGTATGTGCGCGTGCGCACGCCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATc                                                                                                      >  6:218562/1‑149 (MQ=255)                              aCAACGCGGACGGCACGCTGCTGCCGGGCATGTATGTGCGCGTGCGCACGCCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATc                                                                                                      >  5:125047/1‑149 (MQ=255)                                   gcgGACGGCACGCTGCTGCCGGGCATGTATGTGCGCGTGCGCACGCCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGa                                                                                                 <  4:83274/149‑1 (MQ=255)                                         ggCACGCTGCTGCCGGGCATGTATGTGCGCGTGCGCACGCCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCAcg                                                                                           >  4:86138/1‑149 (MQ=255)                                            aCGCTGCTGCCGGGCATGTATGTGCGCGTGCGCACGCCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCAcgcgc                                                                                        >  7:297271/1‑149 (MQ=255)                                              gctgctGCCGGGCATGTATGTGCGCGTGCGCACGCCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCgg                                                                                      >  1:201394/1‑149 (MQ=255)                                                              tatgtGCGCGTGCGCACGCCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGAt                                                                      <  5:218562/149‑1 (MQ=255)                                                                tgtgCGCGTGCGCACGCCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATg                                                                     <  8:297271/148‑1 (MQ=255)                                                                               gCCTCAAGGCACCGACAACCACGCCATCCTGGTCCTACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTgg                                                      >  5:317157/1‑148 (MQ=255)                                                                               gCCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTgg                                                      >  2:190622/1‑148 (MQ=255)                                                                                ccTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAAGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCa                                                    <  2:42441/149‑1 (MQ=255)                                                                                 cTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTgg                                                      >  8:195975/1‑146 (MQ=255)                                                                                  ggccaaccctgcggggctgccgacgatcacctgatcgcccggctccagcccctcggtaatctGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGa                                                  >  8:46750‑M1/63‑149 (MQ=255)                                                                                     caaccctgcggggctgccgacgatcacctgatcgcccggctccagcccctcggtaatctGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCt                                                        >  5:81141‑M1/60‑140 (MQ=255)                                                                                     caaccctgcggggctgccgacgatcacctgatcgcccggctccagcccctcggtaatctGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCt                                                        <  6:81141‑M1/81‑1 (MQ=255)                                                                                           cGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTcgc                                                           >  5:285272/1‑131 (MQ=255)                                                                                           cGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTcgc                                                           <  6:285272/131‑1 (MQ=255)                                                                                            gACAACCACGCCATCCTGGTCCTACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAggg                                        <  6:317157/149‑1 (MQ=255)                                                                                            gACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAggg                                        <  3:86138/149‑1 (MQ=255)                                                                                               aaCCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCt                                     <  2:201394/149‑1 (MQ=255)                                                                                                aCCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTg                                    <  7:84690/149‑1 (MQ=255)                                                                                                 ccACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTg                                    >  8:106548/1‑148 (MQ=255)                                                                                                  cACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTg                                    >  3:292197/1‑147 (MQ=255)                                                                                                       cATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGTGGCTGGAGCCgg                             <  1:190622/149‑1 (MQ=255)                                                                                                       cATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCgg                             >  2:79447/1‑149 (MQ=255)                                                                                                       cATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCgg                             <  7:195975/149‑1 (MQ=255)                                                                                                              gTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATc                       <  6:125047/148‑1 (MQ=255)                                                                                                                 ccACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGt                   <  3:239133/149‑1 (MQ=255)                                                                                                                   acaGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGa                 >  1:240662/1‑149 (MQ=255)                                                                                                                   acaGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCACCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGa                 >  3:36176/1‑149 (MQ=255)                                                                                                                              ttCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGc      >  4:266827/1‑149 (MQ=255)                                                                                                                                cAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCgg                             >  4:212994/1‑124 (MQ=255)                                                                                                                                  gCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAACCCCg  >  5:249810/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                       CGGCCAGGTCATCCTGCGGGGGCGCTTCGACAACGCGGACGGCACGCTGCTGCCGGGCATGTATGTGCGCGTGCGCACGCCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCG  >  NC_002947/3213731‑3214008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.