New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3213874 =	38 (0.770)	3 (0.060)	3/246	NT	7.7%	coding (941/1137 nt)	mexC	multidrug RND transporter membrane fusion protein MexC
	?	NC_002947	3213958 =	35 (0.740)					coding (1025/1137 nt)	mexC	multidrug RND transporter membrane fusion protein MexC

CCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTCATCCAT  >  NC_002947/3213810‑3214106                                                                                                                                                     |                                                                                                                                                     ccTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAAGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCa                                                                                                                                                      <  2:42441/149‑1 (MQ=255)   ggccaaccctgcggggctgccgacgatcacctgatcgcccggctccagcccctcggtaatctGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGa                                                                                                                                                    >  8:46750‑M1/63‑149 (MQ=255)             gACAACCACGCCATCCTGGTCCTACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAggg                                                                                                                                          <  6:317157/149‑1 (MQ=255)             gACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAggg                                                                                                                                          <  3:86138/149‑1 (MQ=255)                aaCCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCt                                                                                                                                       <  2:201394/149‑1 (MQ=255)                 aCCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTg                                                                                                                                      <  7:84690/149‑1 (MQ=255)                  ccACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTg                                                                                                                                      >  8:106548/1‑148 (MQ=255)                   cACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTg                                                                                                                                      >  3:292197/1‑147 (MQ=255)                        cATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGTGGCTGGAGCCgg                                                                                                                               <  1:190622/149‑1 (MQ=255)                        cATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCgg                                                                                                                               >  2:79447/1‑149 (MQ=255)                        cATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCgg                                                                                                                               <  7:195975/149‑1 (MQ=255)                               gTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATc                                                                                                                         <  6:125047/148‑1 (MQ=255)                                  ccACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGt                                                                                                                     <  3:239133/149‑1 (MQ=255)                                    acaGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGa                                                                                                                   >  1:240662/1‑149 (MQ=255)                                    acaGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCACCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGa                                                                                                                   >  3:36176/1‑149 (MQ=255)                                               ttCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGc                                                                                                        >  4:266827/1‑149 (MQ=255)                                                 cAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCgg                                                                                                                               >  4:212994/1‑124 (MQ=255)                                                   gCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAACCCCg                                                                                                    >  5:249810/1‑149 (MQ=255)                                                              tctgccagcgcgagccttgcatcacgccggtgcgcaccgcgcgtgcctcggcgatgccattggtggcgaccaagacccgcgcctggcAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGcc                                                                                         >  8:46750‑M2/88‑149 (MQ=255)                                                                    agcgcgagccttgcatcacgccggtgcgcaccgcgcgtgcctcggcgatgccattggtggcgaccaagacccgcgcctggcAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTg                                                                                            <  6:81141‑M2/59‑1 (MQ=255)                                                                    agcgcgagccttgcatcacgccggtgcgcaccgcgcgtgcctcggcgatgccattggtggcgaccaagacccgcgcctggcAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTg                                                                                            >  5:81141‑M2/82‑140 (MQ=255)                                                                    AGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGt                                                                                   >  2:240662‑M1/1‑149 (MQ=255)                                                                      gcgcGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAgg                                                                                                >  3:3062/1‑134 (MQ=255)                                                                      gcgcGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAgg                                                                                                <  4:3062/134‑1 (MQ=255)                                                                      gcgcGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTgg                                                                                           >  7:138858/1‑139 (MQ=255)                                                                      gcgcGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTgg                                                                                           <  8:138858/139‑1 (MQ=255)                                                                              cTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGccc                                                                                                      <  3:142725/120‑1 (MQ=255)                                                                              cTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGccc                                                                                                      >  4:142725/1‑120 (MQ=255)                                                                              cTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGc                                                                                          <  7:149555/132‑1 (MQ=255)                                                                              cTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGc                                                                                          >  8:149555/1‑132 (MQ=255)                                                                                        accaATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCa                                                               <  3:266827/149‑1 (MQ=255)                                                                                          caATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGa                                                             <  7:106548/149‑1 (MQ=255)                                                                                          caATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGa                                                             <  1:79447/149‑1 (MQ=255)                                                                                          caATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAACCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGa                                                             <  6:249810/149‑1 (MQ=255)                                                                                                          gCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTgccgc                                             >  5:293828/1‑149 (MQ=255)                                                                                                            aCGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTgccgcc                                            >  5:85827/1‑148 (MQ=255)                                                                                                              gcgcgGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAg                                         <  6:293828/149‑1 (MQ=255)                                                                                                              gcgcgGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAg                                         >  6:137766/1‑149 (MQ=255)                                                                                                                  ggTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGAt                                     <  5:137766/149‑1 (MQ=255)                                                                                                                           cGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAggg                              >  2:141036/1‑147 (MQ=255)                                                                                                                                      aaGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGGATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGACGACCAGGGATGCGAGGGAAGTGAGATGTc                  >  3:268591/1‑148 (MQ=255)                                                                                                                                           tCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGaaacaaa                                                       <  2:162045/106‑1 (MQ=255)                                                                                                                                           tCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGaaacaaa                                                       >  1:162045/1‑106 (MQ=255)                                                                                                                                                     aGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTcatccat  <  4:292197/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CCTCAAGGCACCGACAACCACGCCATCCTGGTCCCACAGCGTGCGGTTCAGCGAGGCAGCGACGGCCAGGCGCGGGTCTTGGTCGCCACCAATGGCATCGCCGAGGCACGCGCGGTGCGCACCGGCGTGATGCAAGGCTCGCGCTGGCAGATTACCGAGGGGCTGGAGCCGGGCGATCAGGTGATCGTCGGCAGCCCCGCAGGGTTGGCCCCCGGTATGCCCGTTGCGCCTGCGCAGAAACAAACGGCTGCCGCCCAGTGATGCGAGGGAAGTGAGATGTCCAGGTTCTTCATCCAT  >  NC_002947/3213810‑3214106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.