New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3428206 =	48 (0.970)	3 (0.060)	3/248	NT	6.2%	coding (117/207 nt)	PP_3043	hypothetical protein
	?	NC_002947	3428250 =	45 (0.940)					coding (161/207 nt)	PP_3043	hypothetical protein

CTCCAGCAGCGGCTATCTGAAGAGACGCTGACATGGCATATACCCAGGCACACCTCGCGGCCGTCGAGCGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTCGGGGCTTCTGGTGCCCGAGCGGATCAAGGCCAG  >  NC_002947/3428058‑3428354                                                                                                                                                       |                                                                                                                                                     cTCCAGCAGCGTCTATCTGAAGAGACGCTGACATGGCATATACCCAGGCACACCTCGCGGCCGTCGAGCGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAg                                                                                                                                                      <  1:273387/149‑1 (MQ=255)  tCCAGCAGCGGCTATCTGAAGAGACGCTGACATGGCATATACCCAGGCACACCTCGCGGCCGTCGAGCGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAgg                                                                                                                                                     >  5:164088/1‑149 (MQ=255)    tcccagccagaggaacgccgaccttcggcggccccctcatagctggccttgatccgctcgggcaccagaagccccgaacgtgtggagatgtagcggccgctcacagccccttacccccatggtaaagccgaaccacgcgggaacgcggg                                                                                                                                                     <  1:35552‑M1/2‑1 (MQ=255)     agcagcGGCTATCTGAAGAGACGCTGACATGGCATATACCCAGGCACACCTCGCGGCCGTCGAGCGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTTTCGGACGGTAGACGAACTGA‑‑TCAAGGcac                                                                                                                                                  >  3:173023/1‑147 (MQ=255)         gcGGCTATCTGAAGAGACGCTGACATGGCATATACCCAGGCACACCTCGCGGCCGTCGAGCGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGa                                                                                                                                              >  2:44961/1‑149 (MQ=255)          cGGCTATCTGAAGAGACGCTGACATGGCATATACCCAGGCACACCTCGCGGCCGTCGAGCGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGa                                                                                                                                              <  3:191977/148‑1 (MQ=255)                      gagaCGCTGACATGGCATATACCCAGGCACACCTCGCGGCCGTCGAGCGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCAcc                                                                                                                                 >  1:159031/1‑149 (MQ=255)                         aCGCTGACATGGCATATACCCAGGCACACCTCGCGGCCGTCGAGCGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGaa                                                                                                                              <  1:44961/149‑1 (MQ=255)                           ttcggcggccccctcatagctggccttgatccgctcgggcaccagaagccccgaacgtgtggagatgtagcggccgctcacagccccttacccccatggtaaagccgaaccacgcgggaacgcggg                                                                                                                                                     >  7:504‑M1/125‑126 (MQ=255)                               aCATGGCATATACCCAGGCACACCTCGCGGCCGTCGAGCGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTcc                                                                                                                        >  2:167563/1‑149 (MQ=255)                                  tGGCATATACCCAGGCACACCTCGCGGCCGTCGAGCGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAg                                                                                                                     >  5:34902/1‑149 (MQ=255)                                      atatACCCAGGCACACCTCGCGGCCGTCGAGCGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCg                                                                                                                 >  1:197209/1‑149 (MQ=255)                                          aCCCAGGCACACCTCGCGGCCGTCGAGCGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTgg                                                                                                             >  1:69236/1‑149 (MQ=255)                                           cccAGGCACACCTCGCGGCCGTCGAGCGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTgg                                                                                                             <  2:159031/148‑1 (MQ=255)                                            ccAGGCACACCTCGCGGCCGTCTAGCGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAg                                                                                                                                                      <  3:70014/106‑1 (MQ=255)                                            ccAGGCACACCTCGCGGCCGTCAAGCGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAg                                                                                                                                                      >  4:70014/1‑106 (MQ=255)                                             cAGGCACACCTCGCGGCCGTCGAGCGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGccc                                                                                                          <  6:24410/149‑1 (MQ=255)                                              aGGCACACCTCGCGGCCGTCGAGCGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCcg                                                                                                         >  1:127570/1‑149 (MQ=255)                                                 gccttgatccgctcgggcaccagaagccccgaacgtgtggagatgtagcggccgctcacagccccttacccccatggtaaagccgaaccacgcgggaacgcgGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGccc                                                                                                          >  2:35552‑M1/103‑147 (MQ=255)                                                          cgGCCGTCGAGCGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTg                                                                                             <  6:34902/149‑1 (MQ=255)                                                           gctcgggcaccagaagccccgaacgtgtggagatgtagcggccgctcacagccccttacccccatggtaaagccgaaccacgcgggaacgcgGGCCCGCGACATGATCCGCACCGAATTGTCCCAGTCCGCGGCcccgag                                                                                                       <  6:223301‑M1/48‑3 (MQ=255)                                                           gctcgggcaccagaagccccgaacgtgtggagaggtagcggccgctcacagccccttacccccatggttaagccgaaccacgctggaacgcgGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCcgcg                                                                                                       >  5:223301‑M1/93‑140 (MQ=255)                                                                tCGAGCGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGATCTCTAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTc                                                                                         <  1:253014/149‑1 (MQ=255)                                                                     cGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTa                                                                                  <  7:34250/149‑1 (MQ=255)                                                                        gCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCa                                                                               >  3:127910/1‑149 (MQ=255)                                                                        gCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCa                                                                               >  5:215068/1‑149 (MQ=255)                                                                           aTTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATgg                                                                            <  2:127570/149‑1 (MQ=255)                                                                            ttGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATggg                                                                           >  2:167400/1‑149 (MQ=255)                                                                            ttGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGGGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATggg                                                                           <  8:211331/149‑1 (MQ=255)                                                                              gcgcGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATgggg                                                                          <  2:197209/148‑1 (MQ=255)                                                                              gcgcGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATgggg                                                                          <  2:69236/148‑1 (MQ=255)                                                                              gcgcGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATgggg                                                                          <  3:2374/148‑1 (MQ=255)                                                                               cgcgTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGt                                                                        <  6:164088/149‑1 (MQ=255)                                                                                       ggagatgtagcggccgctcacagccccttacccccatggtaaagccgaaccacgcgggaacgcgg                                                                                                                                                      <  3:96491‑M1/1‑1 (MQ=255)                                                                                       ggagatgtagcggccgctcacagccccttacccccatggtaaagccgaaccacgcgggaacgcgg                                                                                                                                                      >  4:96491‑M1/65‑65 (MQ=255)                                                                                       gAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCt                                                                <  6:274309/149‑1 (MQ=255)                                                                                          cGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCtgtg                                                             <  4:127910/149‑1 (MQ=255)                                                                                             gttgttCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATggg                                                                           <  2:133415/132‑1 (MQ=255)                                                                                             gttgttCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATggg                                                                           >  1:133415/1‑132 (MQ=255)                                                                                             gttgttCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGc                                                          >  5:285543/1‑149 (MQ=255)                                                                                                   cGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCg                                                     <  6:285543/148‑1 (MQ=255)                                                                                                        cAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACAt                                               <  1:167563/149‑1 (MQ=255)                                                                                                         aGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACAtc                                              >  3:241651/1‑149 (MQ=255)                                                                                                             aCCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCca                                          <  1:167400/149‑1 (MQ=255)                                                                                                               cGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCa                                                                                                                      <  5:111833/71‑1 (MQ=255)                                                                                                               cGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCa                                                                                                                      >  6:111833/1‑71 (MQ=255)                                                                                                                    cGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTc                                   >  5:288117/1‑149 (MQ=255)                                                                                                                    cGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTc                                   <  6:288117/149‑1 (MQ=255)                                                                                                                     gTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTCg                                  <  6:215068/149‑1 (MQ=255)                                                                                                                              cGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTTGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTCg                                  <  3:146201/140‑1 (MQ=255)                                                                                                                              cGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTAGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTCg                                  >  4:146201/1‑140 (MQ=255)                                                                                                                               ggACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTCGGGGCTTCTgg                        >  4:265425/1‑149 (MQ=255)                                                                                                                               ggACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTCGGGGCTTCTgg                        >  2:226355/1‑149 (MQ=255)                                                                                                                                gACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTCgg                                 >  7:56836/1‑139 (MQ=255)                                                                                                                                gACGGTAGACGAACGCC‑‑TCACGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTCgg                                 <  8:56836/139‑1 (MQ=255)                                                                                                                                   ggTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTCGGGGCTTCTGGTGcc                    >  5:27404/1‑149 (MQ=255)                                                                                                                                     tAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTCGGGGCTTCTGGTGccc                   >  4:37554/1‑148 (MQ=255)                                                                                                                                        aCGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCTTGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTCGGGGCTTCTGGTGCCCGAGc               >  1:225520/1‑149 (MQ=255)                                                                                                                                         cGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTCGGGGCTTCTGGTGCCCGAGc               <  2:36912/148‑1 (MQ=255)                                                                                                                                               gA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACCTTCGGGGCTTCTGGTGCCCGAGCGGATc          >  1:317526/1‑147 (MQ=255)                                                                                                                                                a‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTCGGGGCTTCTGGTGCCCGAGCGGATCAAg       <  2:225520/149‑1 (MQ=255)                                                                                                                                                a‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTCGGGGCTTCTGGTGCCCGAGCGGATCAAg       <  6:27404/149‑1 (MQ=255)                                                                                                                                                    cAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTCGGGGCTTCTGGTGCCCGAGCGGATCAAGGc     >  2:158551/1‑149 (MQ=255)                                                                                                                                                      aGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTCGGGGCTTCTGGTGCCCGAGCGGATCAAGGCCa   <  4:173023/149‑1 (MQ=255)                                                                                                                                                       GGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTCGGGGCTTCTGGTGCCCGAGCGGATCAAGGCCAg  >  2:317526‑M1/1‑149 (MQ=255)                                                                                                                                                       GGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTCGGGGCTTCTGGTGCCCGAGCGGATCAAGGCCAg  >  1:158551‑M1/1‑149 (MQ=255)                                                                                                                                                       |                                                                                                                                                     CTCCAGCAGCGGCTATCTGAAGAGACGCTGACATGGCATATACCCAGGCACACCTCGCGGCCGTCGAGCGTGCGATTGCGCGTGGCGAACGGGTTGTTCGATACAGCGACCGCACCGTGGAGTATCGGACGGTAGACGAACTGA‑‑TCAAGGCCCGCGACCTGATCCGCACCGAATTGTCCCAGTCCGCTGGCCCGCGTTCCCGCGTGGTTCGGCTTTACCATGGGGGTAAGGGGCTGTGAGCGGCCGCTACATCTCCACACGTTCGGGGCTTCTGGTGCCCGAGCGGATCAAGGCCAG  >  NC_002947/3428058‑3428354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.