New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3862763 =	76 (1.540)	4 (0.080)	4/246	NT	5.8%	coding (1686/3282 nt)	PP_3413	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	3862825 =	58 (1.220)					coding (1748/3282 nt)	PP_3413	two‑component system sensor histidine kinase/response regulator

AGTTGATCAACCGCTGGCGCACCAGCACACTGGTGAGCGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCG  >  NC_002947/3862615‑3862909                                                                                                                                                     |                                                                                                                                                    aGTTGATCAACCGCTGGCGCACCAGCACACTGGTGAGCGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAAc                                                                                                                                                     <  5:283025/149‑1 (MQ=255)  ggccgctgcggctatcttccagggccagttccagcagaccgatcacggcattcatcggggtgcggatctcatggctcatggtggccaggaaggtgcttttggtctggctggcctgttcggcatcgtccttggcctggcgtaactgttcc                                                                                                                                                    >  6:306929‑M1/148‑149 (MQ=255)  gTTGATCAACCGCTGGCGCACCAGCACACTGGTGAGCGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAAc                                                                                                                                                     >  6:52153/1‑148 (MQ=255)      gctgcggctatcttccagggccagttccagcagccggatcacggcattcatcggggtgcggatctcatggctcatggtggccaggaaggtgcttgtggtgtggctggcgtgttcggcatcgtccttggcctggcgtacgtgttACAg                                                                                                                                                  <  6:267454‑M1/4‑1 (MQ=255)      aTCAACCGCTGGCGCACCAGCACACTGGTGAGCGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAgcg                                                                                                                                                >  6:181720/1‑149 (MQ=255)       tCAACCGCTGGCGCACCAGCACACTGGTGAGTGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAgcg                                                                                                                                                >  1:41157/1‑148 (MQ=255)        cAACCGCTGGCGCACCAGCACACTGGTGAGCGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCa                                                                                                                                              >  4:269356/1‑149 (MQ=255)        cAACCGCTGGCGCACCAGCACACTGGTGAGCGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCa                                                                                                                                              >  2:241619/1‑149 (MQ=255)         aaCCGCTGGCGCACCAGCACACTGGTGAGCGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCAc                                                                                                                                             >  5:184331/1‑149 (MQ=255)           ccGCTGGCGCACCAGCACACTGGTGAGCGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCg                                                                                                                                           <  2:106493/149‑1 (MQ=255)              cTGGCGCACCAGCACACTGGTGAGCGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAgg                                                                                                                                        >  5:264769/1‑149 (MQ=255)                 gcgcACCAGCACACTGGTGAGTGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGca                                                                                                                                      <  2:41157/148‑1 (MQ=255)                 gcgcACCAGCACACTGGTGAGCGACAGGCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCGTGCTGCTGGCCGTGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCTCACCGAGTca                                                                                                                                      <  7:67986/148‑1 (MQ=255)                 gcgcACCAGCACACTGGTGAGCGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGca                                                                                                                                      <  5:52153/148‑1 (MQ=255)                   gcACCAGCACACTGGTGAGCGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGcac                                                                                                                                     <  7:243920/147‑1 (MQ=255)                   gcACCAGCACACTGGTGAGCGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGcac                                                                                                                                     >  8:243920/1‑147 (MQ=255)                       cAGCACACTGGTGAGCGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCAcg                                                                                                                               >  7:267303/1‑149 (MQ=255)                            cacTGGTGAGCGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCtt                                                                                                                          <  4:120619/149‑1 (MQ=255)                               tGGTGAGCGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAg                                                                                                                       >  5:182308/1‑149 (MQ=255)                                      cGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGc                                                                                                                                  >  3:121645/1‑131 (MQ=255)                                      cGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGc                                                                                                                                  <  4:121645/131‑1 (MQ=255)                                      cGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGc                                                                                                                <  3:269356/149‑1 (MQ=255)                                           atcacggcattcatcggggtgcggatctcatggctcatggtggccaggaaggtgcttttggtctggctggcctgttcggcatcgtccttggcctggcgtaactgttCCAGCAGCCCGCGGCTCAGCACGCGCTTCAGGCACAGCTcgcg                                                                                                           >  2:7485‑M1/107‑149 (MQ=255)                                            ccccTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTc                                                                                                                         <  6:160103/134‑1 (MQ=255)                                            ccccTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTc                                                                                                                         >  5:160103/1‑134 (MQ=255)                                            ccccTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAg                                                                                                                       >  5:56053/1‑136 (MQ=255)                                            ccccTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAg                                                                                                                       <  6:56053/136‑1 (MQ=255)                                              ccTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCt                                                                                                         >  2:298668/1‑148 (MQ=255)                                                  gcgcGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑cc                                                                                                   >  2:57914/1‑149 (MQ=255)                                                      gACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCgg                                                                                               <  5:181720/149‑1 (MQ=255)                                                      gACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCgg                                                                                               <  1:235159/149‑1 (MQ=255)                                                       aCTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCggg                                                                                              <  2:159186/149‑1 (MQ=255)                                                          aCCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGgctg                                                                                           >  5:116184/1‑149 (MQ=255)                                                           ccGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGgctgc                                                                                          >  7:270181/1‑149 (MQ=255)                                                            cGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGgctgct                                                                                         >  8:158472/1‑149 (MQ=255)                                                            cGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGgctgct                                                                                         <  1:298668/149‑1 (MQ=255)                                                             gCACCCTTGCTTTGCAGGGGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGctgctg                                                                                        <  6:184331/149‑1 (MQ=255)                                                                 ggatctcatggctcatggtggccaggaaggtgcttttggtctggctggcctgttcggcatcgtccttggcctggcgtaactgttCCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAAc                                                                                    >  2:29887‑M1/85‑149 (MQ=255)                                                                 ccTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGaa                                                                                     >  5:57031/1‑148 (MQ=255)                                                                  cTGGCTTTGCAGGTGCTGGCGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACa                                                                                   <  8:152314/149‑1 (MQ=255)                                                                     gCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGtt                                                                                <  8:270181/149‑1 (MQ=255)                                                                          gCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCa                                                                                                                        <  5:2374/105‑1 (MQ=255)                                                                          gCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCa                                                                                                                        >  6:2374/1‑105 (MQ=255)                                                                            aGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCAGAG‑CCGCGGGctgctg                                                                                        <  7:10898/134‑1 (MQ=255)                                                                            aGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCAGAG‑CCGCGGGctgctg                                                                                        >  8:10898/1‑134 (MQ=255)                                                                                    gtgctgTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAg                                                                   <  6:182308/147‑1 (MQ=255)                                                                                    gtgctgTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGa                                                                 <  1:57914/149‑1 (MQ=255)                                                                                      gctgTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCCGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGAc                                                                >  3:201281/1‑148 (MQ=255)                                                                                        tgTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGAt                                                             >  4:48601/1‑149 (MQ=255)                                                                                          tCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGc                                                           <  4:7741/149‑1 (MQ=255)                                                                                            ggCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCggg                                                                                              <  7:275615/112‑1 (MQ=255)                                                                                            ggCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCggg                                                                                              >  8:275615/1‑112 (MQ=255)                                                                                               ccTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGaa                                                       >  1:63353/1‑148 (MQ=255)                                                                                               ccTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGaa                                                       >  6:193183/1‑148 (MQ=255)                                                                                                ctgctgctgGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGaa                                                       >  4:212417/1‑147 (MQ=255)                                                                                                    tgctgGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGgcc                                                 >  2:145767/1‑149 (MQ=255)                                                                                                      ctgGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAGCCCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGgcca                                                <  1:241619/149‑1 (MQ=255)                                                                                                      ctgGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGgcca                                                <  2:63353/148‑1 (MQ=255)                                                                                                           ggctggcctgttcggcatcgtccttggcctggcgtaactgttCCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTgg                                                                                       <  8:275594‑M1/62‑1 (MQ=255)                                                                                                           ggctggcctgttcggcatcgtccttggcctggcgtaactgttCCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTgg                                                                                       >  7:275594‑M1/43‑104 (MQ=255)                                                                                                                tggtgTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCaa                                      >  7:92104/1‑148 (MQ=255)                                                                                                                  gtgtTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCaaaa                                    <  3:200226/148‑1 (MQ=255)                                                                                                                  gtgtTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCaaaa                                    <  6:90205/148‑1 (MQ=255)                                                                                                                  gtgtTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAg                                   >  5:217263/1‑149 (MQ=255)                                                                                                                      tCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCAcc                               >  8:145186/1‑149 (MQ=255)                                                                                                                      tCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCAcc                               >  5:80218/1‑149 (MQ=255)                                                                                                                        tGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCtt                             >  2:103699/1‑149 (MQ=255)                                                                                                                        tGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTAGAACAGTTACGCCa                                                                          >  3:198186/1‑104 (MQ=255)                                                                                                                        tGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTAGAACAGTTACGCCa                                                                          <  4:198186/104‑1 (MQ=255)                                                                                                                         ggAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTc                            >  1:271103/1‑149 (MQ=255)                                                                                                                          gAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCg                                                         >  6:219710/1‑119 (MQ=255)                                                                                                                          gAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCg                                                         <  5:219710/119‑1 (MQ=255)                                                                                                                          gAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTcc                           <  2:271103/149‑1 (MQ=255)                                                                                                                           aaCAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGa                                                                                                       >  4:59591/1‑73 (MQ=255)                                                                                                                           aaCAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGa                                                                                                       <  3:59591/73‑1 (MQ=255)                                                                                                                            aCAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTg                         <  3:212417/149‑1 (MQ=255)                                                                                                                               gTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGcc                      <  3:48601/149‑1 (MQ=255)                                                                                                                                  aCCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGCTGCCGCACAGGCCAGCCAGACCAAAAGCACCTTCCTGGccac                    >  4:12511/1‑148 (MQ=255)                                                                                                                                  aCCTGCGCAAGCCGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGccac                    <  4:201281/148‑1 (MQ=255)                                                                                                                                   ccTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGccacca                  <  8:267303/149‑1 (MQ=255)                                                                                                                                    cTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCAccat                 >  3:109070/1‑149 (MQ=255)                                                                                                                                             cTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCAccatgagccatga        <  4:109070/149‑1 (MQ=255)                                                                                                                                              tGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGc                       >  3:103073/1‑133 (MQ=255)                                                                                                                                              tGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGc                       <  4:103073/133‑1 (MQ=255)                                                                                                                                                   aaCCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATcc   <  1:103699/148‑1 (MQ=255)                                                                                                                                                   aaCCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCg  <  6:116184/149‑1 (MQ=255)                                                                                                                                                     CCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCAccatga               >  3:202905‑M1/1‑134 (MQ=255)                                                                                                                                                     CCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCAccatga               <  4:202905‑M1/134‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    AGTTGATCAACCGCTGGCGCACCAGCACACTGGTGAGCGACAGCCCCTGGCGCGACTACCGCACCCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCG  >  NC_002947/3862615‑3862909

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.