New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3862763 =	76 (1.540)	4 (0.080)	4/246	NT	5.8%	coding (1686/3282 nt)	PP_3413	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	3862825 =	58 (1.220)					coding (1748/3282 nt)	PP_3413	two‑component system sensor histidine kinase/response regulator

CCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATGAATGCCGTGATCGGTCTGCTGGAACTGGCCCTGGAAGATAGCCGCAGCGGCC  >  NC_002947/3862679‑3862971                                                                                                                                                    |                                                                                                                                                   ggatctcatggctcatggtggccaggaaggtgcttttggtctggctggcctgttcggcatcgtccttggcctggcgtaactgttCCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAAc                                                                                                                                                  >  2:29887‑M1/85‑149 (MQ=255) ccTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGaa                                                                                                                                                   >  5:57031/1‑148 (MQ=255)  cTGGCTTTGCAGGTGCTGGCGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACa                                                                                                                                                 <  8:152314/149‑1 (MQ=255)     gCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGtt                                                                                                                                              <  8:270181/149‑1 (MQ=255)                    gtgctgTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAg                                                                                                                                 <  6:182308/147‑1 (MQ=255)                    gtgctgTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGa                                                                                                                               <  1:57914/149‑1 (MQ=255)                      gctgTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCCGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGAc                                                                                                                              >  3:201281/1‑148 (MQ=255)                        tgTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGAt                                                                                                                           >  4:48601/1‑149 (MQ=255)                          tCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGc                                                                                                                         <  4:7741/149‑1 (MQ=255)                               ccTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGaa                                                                                                                     >  1:63353/1‑148 (MQ=255)                               ccTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGaa                                                                                                                     >  6:193183/1‑148 (MQ=255)                                ctgctgctgGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGaa                                                                                                                     >  4:212417/1‑147 (MQ=255)                                    tgctgGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGgcc                                                                                                               >  2:145767/1‑149 (MQ=255)                                      ctgGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAGCCCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGgcca                                                                                                              <  1:241619/149‑1 (MQ=255)                                      ctgGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGgcca                                                                                                              <  2:63353/148‑1 (MQ=255)                                                tggtgTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCaa                                                                                                    >  7:92104/1‑148 (MQ=255)                                                  gtgtTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCaaaa                                                                                                  <  6:90205/148‑1 (MQ=255)                                                  gtgtTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCaaaa                                                                                                  <  3:200226/148‑1 (MQ=255)                                                  gtgtTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAg                                                                                                 >  5:217263/1‑149 (MQ=255)                                                      tCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCAcc                                                                                             >  8:145186/1‑149 (MQ=255)                                                      tCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCAcc                                                                                             >  5:80218/1‑149 (MQ=255)                                                        tGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCtt                                                                                           >  2:103699/1‑149 (MQ=255)                                                        tGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTAGAACAGTTACGCCa                                                                                                                                        >  3:198186/1‑104 (MQ=255)                                                        tGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTAGAACAGTTACGCCa                                                                                                                                        <  4:198186/104‑1 (MQ=255)                                                         ggAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTc                                                                                          >  1:271103/1‑149 (MQ=255)                                                          gAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCg                                                                                                                       <  5:219710/119‑1 (MQ=255)                                                          gAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCg                                                                                                                       >  6:219710/1‑119 (MQ=255)                                                          gAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTcc                                                                                         <  2:271103/149‑1 (MQ=255)                                                            aCAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTg                                                                                       <  3:212417/149‑1 (MQ=255)                                                               gTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGcc                                                                                    <  3:48601/149‑1 (MQ=255)                                                                  aCCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGCTGCCGCACAGGCCAGCCAGACCAAAAGCACCTTCCTGGccac                                                                                  >  4:12511/1‑148 (MQ=255)                                                                  aCCTGCGCAAGCCGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGccac                                                                                  <  4:201281/148‑1 (MQ=255)                                                                   ccTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGccacca                                                                                <  8:267303/149‑1 (MQ=255)                                                                    cTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCAccat                                                                               >  3:109070/1‑149 (MQ=255)                                                                             cTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCAccatgagccatga                                                                      <  4:109070/149‑1 (MQ=255)                                                                              tGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGc                                                                                     <  4:103073/133‑1 (MQ=255)                                                                              tGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGc                                                                                     >  3:103073/1‑133 (MQ=255)                                                                                   gttccagcagcccgcggctcagcgcgagctgtgcctgaagcgcgtgctgtgcctcggtgcgctggAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATcc                                                                 >  2:29887‑M2/66‑149 (MQ=255)                                                                                   aaCCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATcc                                                                 <  1:103699/148‑1 (MQ=255)                                                                                   aaCCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCg                                                                <  6:116184/149‑1 (MQ=255)                                                                                     CCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCAccatga                                                                             >  3:202905‑M1/1‑134 (MQ=255)                                                                                     CCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCAccatga                                                                             <  4:202905‑M1/134‑1 (MQ=255)                                                                                      ccagcagcccgcggctcagcgcgagctgtgcctgaagcgcgtgctgtgcctcggtgcgctggAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGgccagcc                                                                                                           >  7:275594‑M2/63‑104 (MQ=255)                                                                                      ccagcagcccgcggctcagcgcgagctgtgcctgaagcgcgtgctgtgcctcggtgcgctggAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGgccagcc                                                                                                           <  8:275594‑M2/42‑1 (MQ=255)                                                                                              cGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATg                                                      >  6:201300/1‑148 (MQ=255)                                                                                                   cacaGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCAccatgagccatgag                                                                     >  4:206279/1‑128 (MQ=255)                                                                                                   cacaGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCAccatgagccatgag                                                                     <  3:206279/128‑1 (MQ=255)                                                                                                    acaGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATg                                                      <  8:290266/142‑1 (MQ=255)                                                                                                    acaGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATg                                                      >  7:290266/1‑142 (MQ=255)                                                                                                      aGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATGAATGCCGTg                                             <  5:201300/149‑1 (MQ=255)                                                                                                         cgcgagctgtgcctgaagcgcgtgctgagccgcgggctgctggAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATGAATGCCGTGAt                                           >  2:7485‑M2/44‑149 (MQ=255)                                                                                                         aCGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGATACGCCAGGCCAAGGACGATGCCGAACAGCCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACGCCGATGAATGCCGTGATc                                          >  5:267454/1‑149 (MQ=255)                                                                                                           gcgcTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGTCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCAACACGATGAATGCCGTGATCgg                                        >  3:218380/1‑149 (MQ=255)                                                                                                            cgcTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATGAATGCCGTGATCGGt                                       <  6:57031/149‑1 (MQ=255)                                                                                                               ttCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATGAATGCCGTGATCGGTctg                                    >  5:205055/1‑149 (MQ=255)                                                                                                                 gcggCTCAGCGCGAGCTGTG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATGAATGCCGTGATCGGTctgct                                  >  4:196017/3‑149 (MQ=255)                                                                                                                 cAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATGAATGCCGTGATCGGTctgc                                   <  5:193183/148‑1 (MQ=255)                                                                                                                  aGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATGAATGCCGTGATCGGTctgctg                                 <  8:92104/149‑1 (MQ=255)                                                                                                                  aGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATGAATGCCGTGATCGGTctgctg                                 <  6:205055/149‑1 (MQ=255)                                                                                                                   ggCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATGAATGCCGTGATc                                          <  4:218425/139‑1 (MQ=255)                                                                                                                   ggCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATGAATGCCGTGATc                                          >  3:218425/1‑139 (MQ=255)                                                                                                                       aaGCGCGTGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATGAATGCCGTGATCGGTCTGCTGGaa                              <  1:7485/146‑1 (MQ=255)                                                                                                                             gcgcTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATGAATGCCGTGATCGGTCTGCTGGAACTGGCCCt                      <  7:145186/149‑1 (MQ=255)                                                                                                                             gcgcTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATGAATGCCGTGATCGGTCTGCTGGAACTGGCCCt                      >  6:9434/1‑149 (MQ=255)                                                                                                                             gcgcTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAACCATGAGATCCGCACCCCGATGAATGCCGTGATCGGTCTGCTGGAACTGGCCCt                      <  6:80218/149‑1 (MQ=255)                                                                                                                                  gAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGAAGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATGAATGCCGTGATCGGTCTGCTGGAACTGGCCCTgg                    >  8:76462/1‑146 (MQ=255)                                                                                                                                      ccGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATGAATGCCGTGATCGGTCTGCTGGAACTGGCCCTGGAAGATa              <  1:145767/149‑1 (MQ=255)                                                                                                                                              tgctgGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATGAATGCCGTGATCGGTCTGCTGGAACTGGCCCTGGAAGATAgccgcagc      >  6:232293/1‑149 (MQ=255)                                                                                                                                                ctgtAACACGTACGCCAGGCCAAGGACGATGCCGAACACGCCAGCCACACCACAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATGAATGCCGTGATCCGGCTGCTGGAACTGGCCCTGGAAGATAGCCGCAGc      <  6:267454‑M2/143‑1 (MQ=255)                                                                                                                                                  ggAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATGAATGCCGTGATCGGTCTGCTGGAACTGGCCCTGGAAGATAGCCGCAGCGGcc  >  6:306929‑M2/3‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                   CCTGGCTTTGCAGGTGCTGGTGCTGTCGGCCCTGCTGCTGGCCGGGGTGGTGTTCTGGAACAGTTACCTGCGCAAGCTGATCAACCAGCGCACCGAGGCACAGCACGCGCTTCAGGCACAGCTCGCGCTGAG‑CCGCGGGCTGCTGGAACAGTTACGCCAGGCCAAGGACGATGCCGAACAGGCCAGCCAGACCAAAAGCACCTTCCTGGCCACCATGAGCCATGAGATCCGCACCCCGATGAATGCCGTGATCGGTCTGCTGGAACTGGCCCTGGAAGATAGCCGCAGCGGCC  >  NC_002947/3862679‑3862971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.