New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4405582	40 (0.810)	4 (0.080)	4/246	NT	8.9%	coding (634/672 nt)	PP_3887	hypothetical protein
	?	NC_002947	= 4405615	43 (0.910)					coding (601/672 nt)	PP_3887	hypothetical protein

CTCCAAAAACGACAAAGCCCAGCTGGGTGGCCGGGCTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGCCCAATGGCTCGGATCCATCTTCACGCCCGTGCGCTCTTCCACGAAGACGCACACCGCTCCTGGC  >  NC_002947/4405437‑4405730                                                                                                                                                   |                                                                                                                                                     ctcCAAAAACGACAAAGCCCAGCTGGGTGGCCGGGCTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGtt                                                                                                                                                    >  3:76354/1‑148 (MQ=255) ctcCAAAAACGACAAAGCCCAGCTGGGTGGCCGGGCTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGtt                                                                                                                                                    <  4:76354/148‑1 (MQ=255)  tcCAAAAACGACAAAGCCCAGCTGGGTGGCCGGGCTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTgg                                                                                                                                                  >  6:310004/1‑149 (MQ=255)    cAAAAACGACAAAGCCCAGCTGGGTGGCCGGGCTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTggg                                                                                                                                                 >  2:18406/1‑148 (MQ=255)      aaaaCGACAAAGCCCAGCTGGGTGGCCGGGCTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGtt                                                                                                                                                    >  4:196950/1‑143 (MQ=255)      aaaaCGACAAAGCCCAGCTGGGTGGCCGGGCTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGtt                                                                                                                                                    <  3:196950/143‑1 (MQ=255)             cAAAGCCCAGCTGGGTGGCCGGGCTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCTTTCGGCCTACAAGTTGGGCAACAGGCCg                                                                                                                                       <  1:18406/149‑1 (MQ=255)              aaaGCCCAGCTGGGTGGCCGGGCTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCg                                                                                                                                       >  1:118829/1‑148 (MQ=255)              aaaGCCCAGCTGGGTGGCCGGGCTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGc                                                                                                                                      >  7:92683/1‑149 (MQ=255)                aGCCCAGCTGGGTGGCCGGGCTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAg                                                                                                                                    >  3:58165/1‑149 (MQ=255)                aGCCCAGCTCGGTGGCCGGGCTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAg                                                                                                                                    >  3:84107/1‑149 (MQ=255)                              gCCGGGCTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTc                                                                                                                        >  5:123505/1‑147 (MQ=255)                                cGGGCTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGATAATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTc                                                                                                                        >  1:232865/1‑146 (MQ=255)                                cGGGCTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGc                                                                                                                    <  2:106644‑M2/149‑2 (MQ=255)                                cGGGCTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGc                                                                                                                    >  4:84107‑M2/1‑148 (MQ=255)                                   gCTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCgcttgc                                                                                                                             <  5:67105/137‑1 (MQ=255)                                   gCTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCgcttgc                                                                                                                             >  6:67105/1‑137 (MQ=255)                                   gCTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGcttg                                                                                                                 >  5:310004‑M2/1‑145 (MQ=255)                                    cTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGcttgt                                                                                                                <  6:90315‑M2/149‑6 (MQ=255)                                     ttttttCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGctggacaagcaagcgctgcggcctgttgcccaacttg                                                                                                                 >  6:203529‑M1/1‑110 (MQ=255)                                     ttttttCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGcttgt                                                                                                                <  5:268391‑M2/148‑6 (MQ=255)                                     ttttttCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACAATCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCAGCAGCGCTTGCTTGTCCAGcttgt                                                                                                                <  6:212052‑M2/148‑6 (MQ=255)                                       ttttCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGctggacaagcaagcgctgcggcctgttgcccaacttgtag                                                                                                              <  5:203529‑M1/148‑41 (MQ=255)                                         ttCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAat                                                                                                            <  6:123505/148‑1 (MQ=255)                                                           ggCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTcc                                                                                         >  6:219953/1‑149 (MQ=255)                                                                  ttATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGAtct                                                                                  <  1:178862/149‑1 (MQ=255)                                                                    aTCACGATGGCGA‑AATAATGCAAAAACACTCGCCAATTCGACAAGCGGCTTTTTAACGCTCTCTAATTAGGCCTACAAGTTGGGCAACAGGCCGAAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGAtct                                                                                  >  2:234461/1‑147 (MQ=255)                                                                             gCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTc                                                                        <  8:92683/148‑1 (MQ=255)                                                                             gCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTc                                                                        <  1:106644/148‑1 (MQ=255)                                                                              cGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCAc                                                                      <  5:90315/149‑1 (MQ=255)                                                                                a‑aaTAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGa                                                                    <  6:268391/149‑1 (MQ=255)                                                                                      atGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTcc                                                                                >  8:250632/1‑132 (MQ=255)                                                                                      atGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGccc                                                                >  3:241594/1‑148 (MQ=255)                                                                                         ccAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGCCCAAt                                                             <  2:232865/148‑1 (MQ=255)                                                                                               cacTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGCCCAATGGCTCg                                                       >  4:256898/1‑148 (MQ=255)                                                                                                acTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGCCCAATGGCTCGGa                                                     <  5:219953/149‑1 (MQ=255)                                                                                                  tCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGa                                                                    >  7:249125/1‑132 (MQ=255)                                                                                                  tCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGa                                                                    <  8:249125/132‑1 (MQ=255)                                                                                                    gCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGctggacaagcaagcgctgcggcctgttgcccaacttgtagg                                                                                                             <  2:47088‑M1/89‑42 (MQ=255)                                                                                                    gCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGctggacaagcaagcgctgcggcctgttgcccaacttgtagg                                                                                                             >  1:47088‑M1/1‑48 (MQ=255)                                                                                                    gCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGCCCAATGGCTCGGATcc                                                  >  6:152324/1‑148 (MQ=255)                                                                                                        aTTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGCCCAATGGCTCg                                                       <  1:37776/139‑1 (MQ=255)                                                                                                        aTTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGCCCAATGGCTCg                                                       >  2:37776/1‑139 (MQ=255)                                                                                                            gTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTACTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGCCCAATGGCTCGGATCCATCTTCAc                                          <  4:242752/148‑1 (MQ=255)                                                                                                            ctctaGCGGCGTTTTCAGGCTCTCTCATTCGGCCTACCACGTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGCCCAATGGCTCGGATGCATCTTCag                                          <  6:150384/144‑2 (MQ=255)                                                                                                             tCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGCCCAATGGCTCGGATCCATCTTCACGc                                        <  2:118829/149‑1 (MQ=255)                                                                                                                    gCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGCCCAATGGCTCGGATCCATCTTCACGCCCGTgcg                                 <  4:241594/149‑1 (MQ=255)                                                                                                                         ttCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGCCCAATGGCTCGGATCCATCTTCACGCCCGTGCGCTCtt                            >  3:38968/1‑149 (MQ=255)                                                                                                                            aCGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGCCCAATGGCTCGGATCCATCTTCACGCCCGTGCGCTCTTCCa                         >  8:233892/1‑149 (MQ=255)                                                                                                                                  tctcATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGCCCAATGGCTCGGATCCATCTTCACGCCCGTGCGCTCTTCCACGAAGa                   >  4:125839/1‑149 (MQ=255)                                                                                                                                  tctcATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGCCCAATGGCTCGGATCCATCTTCACGCCCGTGCGCTCTTCCACGAAGa                   >  7:73868/1‑149 (MQ=255)                                                                                                                                    tcATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCCGATCTCCGCCCAGTCACGCGCCCAATGGCTCGGCTCCCTCTTCACGCCCGTGCGCTCTTCCACGCAGCCg                 >  2:131462/1‑149 (MQ=255)                                                                                                                                    tcATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGCCCAATGGCTCGGATCCATCTTCACGCCCGTGCGCTCTTCCACGAAGACg                 >  7:34450/1‑149 (MQ=255)                                                                                                                                            ccTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGcttgtaggccgaatgagagagcgtgaaaaagccgcttgacgaattggc                                                                     >  1:47088‑M2/1‑41 (MQ=255)                                                                                                                                            ccTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGcttgtaggccgaatgagagagcgtgaaaaagccgcttgacgaattggc                                                                     <  2:47088‑M2/89‑49 (MQ=255)                                                                                                                                             cTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGcttgtaggccgaatgagagagcgtgaaaaagccgcttgacgaattggcgagtgttttggcattatttcgccatcgtgataatttcgcctttggcgaacagatcgaaaa         <  5:203529‑M2/148‑109 (MQ=255)                                                                                                                                             cTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGCCCAATGGCTCGGATCCATCTTCAc                                          <  7:223236/115‑1 (MQ=255)                                                                                                                                             cTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGCCCAATGGCTCGGATCCATCTTCAc                                          >  8:223236/1‑115 (MQ=255)                                                                                                                                             cTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGCCCAATGGCTCGGATCCATCTTCACGCCCGTGCGCTCTTCCACGAAGACGCACACCGCt        >  6:78800/1‑149 (MQ=255)                                                                                                                                               aCAAGctggacaagcaagcgctgctgcctgttgcccaacttgtaggccgaatgagagagcgtgaaaaagccgcttgacgaattggcgattgttttggcattatttcgccatcgtgataatttcgcctttggcgaacagatcgaaaaaa       <  6:212052‑M1/148‑144 (MQ=255)                                                                                                                                               aCAAGctggacaagcaagcgctgcggcctgttgcccaacttgtaggccgaatgagagagcgtgaaaaagccgcttgacgaattggcgagtgttttggcattatttcgccatcgtgataatttcgcctttggcgaacagatcgaaaaaag      <  6:90315‑M1/149‑145 (MQ=255)                                                                                                                                               aCAAGctggacaagcaagcgctgcggcctgttgcccaacttgtaggccgaatgagagagcgtgaaaaagccgcttgacgaattggcgagtgttttggcattatttcgccatcgtgataatttcgcctttggcgaacagatcgaaaaaa       <  5:268391‑M1/148‑144 (MQ=255)                                                                                                                                                cAAGctggacaagcaagcgctgcggcctgttgcccaacttgtaggccgaatgagagagcgtgaaaaagccgcttgacgaattggcgagtgttttggcattatttcgccatcgtgataatttcgcctttggcgaacagatcgaaaaaagc     >  5:310004‑M1/1‑4 (MQ=255)                                                                                                                                                cAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGcttgtaggccgaatgagagagcgtgaaaaagccgcttgacgaattggcgagtgttttggcattatttcgccatcgtgataatttcgcctttggcgaacagatcgaaaaaa       >  6:203529‑M2/1‑37 (MQ=255)                                                                                                                                                   gctggacaagcaagcgctgcggcctgttgcccaacttgtaggccgaatgagagagcgtgaaaaagccgcttgacgaattggcgagtgttttggcattatttcgccatcgtgataatttcgcctttggcgaacagatcgaaaaaagcccg  >  4:84107‑M1/1‑1 (MQ=255)                                                                                                                                                   gctggacaagcaagcgctgcggcctgttgcccaacttgtaggccgaatgagagagcgtgaaaaagccgcttgacgaattggcgagtgttttggcattatttcgccatcgtgataatttcgcctttggcgaacagatcgaaaaaagcccg  <  2:106644‑M1/149‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                     CTCCAAAAACGACAAAGCCCAGCTGGGTGGCCGGGCTTTTTTCGATCTGTTCGCCAAAGGCGAAATTATCACGATGGCGA‑AATAATGCCAAAACACTCGCCAATTCGTCAAGCGGCTTTTTCACGCTCTCTCATTCGGCCTACAAGTTGGGCAACAGGCCGCAGCGCTTGCTTGTCCAGCTTGTCAATATGGGCGCCCAATCGCTCCCAGATCTCCGCCCAGTCACGAGCCCAATGGCTCGGATCCATCTTCACGCCCGTGCGCTCTTCCACGAAGACGCACACCGCTCCTGGC  >  NC_002947/4405437‑4405730

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.