New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5252364 =	54 (1.090)	6 (0.130)	6/242	NT	9.4%	coding (153/456 nt)	PP_4628	hypothetical protein
	?	NC_002947	5252443 =	65 (1.390)					coding (74/456 nt)	PP_4628	hypothetical protein

TATCGCCGTAGCTGGAGTCGCCCAAGGCGATCACCGCGCCAGGCAGGCCGCGCCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGACGGGCGACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGG  >  NC_002947/5252219‑5252506                                                                                                                                                  |                                                                                                                                               tATCGCCGTAGCTGGAGTCGCCCAAGGCGATCACCGCGCCAGGCAGGCCGCGCCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAg                                                                                                                                             >  6:86853/1‑149 (MQ=255)   tCGCCGTAGCTGGAGTCGCCCAAGGCGATCACCGCGCCAGGCAGGCCGCGCCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGc                                                                                                                                           >  4:107206/1‑149 (MQ=255)   tCGCCGTAGCTGGAGTCGCCCAAGGCGATCACCGCGCCAGGCAGGCCGCGCCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGc                                                                                                                                           <  7:296810/149‑1 (MQ=255)    ggcggccttttgccagcgttgaatgctagtatcctacgttttcactcagtttcggaatcctctacccgatgaaagtcgccattatttccggctcggtctatggcaccgccgaagaagtcgcccgtcatgctgaatcgctgctCAAGGCg                                                                                                                                          <  4:80181‑M1/7‑1 (MQ=255)       cGTAGCTGGAGTCGCCCAAGGCGATCACCGCGCCAGGCAGGCCGCGCCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCg                                                                                                                                       <  5:86853/149‑1 (MQ=255)        gTAGCTGGAGTCGCCCAAGGCGATCACCGCGCCAGGCAGGCCGCGCCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCgg                                                                                                                                      <  3:239935/149‑1 (MQ=255)           gCTGGAGTCGCCCAAGGCGATCACCGCGCCAGGCAGGCCGCGCCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCgggg                                                                                                                                    <  4:44128/148‑1 (MQ=255)            cTGGAGTCGCCCAAGGCGATCACCGCGCCAGGCAGGCCGCGCCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGc                                                                                                                                  <  4:178587/149‑1 (MQ=255)                  gcGCCCAAGGCGATCACCGCGCCAGGCAGGCCGCGCCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGcc                                                                                                                            <  2:219888/148‑1 (MQ=255)                     cccAAGGCGATCACCGCGCCAGGCAGGCCGCGCCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCt                                                                                                                          >  6:71549/1‑148 (MQ=255)                      ccAAGGCGATCACCGCGCCAGGCAGGCCGCGCCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGa                                                                                                                        <  5:90571/149‑1 (MQ=255)                      ccAAGGCGATCACCGCGCCAGGCAGGCCGCGCCAGGCCGCAGGCAGGGGGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGGCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCGGa                                                                                                                        <  5:90569/149‑1 (MQ=255)                           gCGATCACCGCGCCAGGCAGGCCGCGCCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGGCCGGCAACTCACCCCTGCCGGTGGTAGAGGGCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATc                                                                                                                   <  2:102825/149‑1 (MQ=255)                                 aCCGCGCCAGGCAGGCCGCGCCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGaa                                                                                                              <  1:209182/148‑1 (MQ=255)                                 aCCGCGCCAGGCAGGCCGCGCCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGaa                                                                                                              <  7:93352/148‑1 (MQ=255)                                  ccGCGCCAGGCAGGCCGCGCCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAgg                                                                                                            <  2:250633/149‑1 (MQ=255)                                    gcgcCAGGCAGGCCGCGCCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGt                                                                                                          <  4:27512/149‑1 (MQ=255)                                     cgcCAGGCAGGCCGCGCCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTg                                                                                                         <  5:71549/149‑1 (MQ=255)                                     cgcCAGGCAGGCCGCGCCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTg                                                                                                         <  3:135762/149‑1 (MQ=255)                                      tacgttttcactcagtttcggaatcctctacccgatgaaagtcgccattatttccggctcggtctatggcaccgccgaagaagtcgcccgtcatgctgaatcgctgctCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTgg                                                                                                        <  1:51694‑M1/41‑1 (MQ=255)                                               gcCGCGCCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCgcag                                                                                               >  3:222179/1‑149 (MQ=255)                                                ctcagtttcggaatcctctacccgatgaaagtcgccattatttccggctcggtctatggcaccgccgaagaagtcgcccgtcatgctgaatcgctgctCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCgcag                                                                                               <  5:267379‑M1/50‑1 (MQ=255)                                                    gcCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGc                                                                                          <  1:167836/149‑1 (MQ=255)                                                                gcagTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAAc                                                                              >  6:132341/1‑149 (MQ=255)                                                                 cagTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAAcc                                                                             <  5:132341/149‑1 (MQ=255)                                                                   gtgtgtCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAAcccc                                                                           <  4:222179/149‑1 (MQ=255)                                                                        tCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCggggg                                                                                                                                   >  3:280334/1‑88 (MQ=255)                                                                        tCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCggggg                                                                                                                                   <  4:280334/88‑1 (MQ=255)                                                                         tgaaagtcgccattatttccggctcggtctatggcaccgccgaagaagtcgcccgtcatgctgaatcgctgctCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCgccgcc                                                                     >  6:267379‑M1/74‑149 (MQ=255)                                                                          aCGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCGATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCt                                                                    >  3:74732/1‑149 (MQ=255)                                                                          aCGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCaa                                                                                                                                              <  5:260899/75‑1 (MQ=255)                                                                          aCGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCaa                                                                                                                                              >  6:260899/1‑75 (MQ=255)                                                                          aCGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGaa                                                                                                              >  6:268315/1‑107 (MQ=255)                                                                          aCGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGaa                                                                                                              <  5:268315/107‑1 (MQ=255)                                                                          aCGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCt                                                                    >  5:305812/1‑149 (MQ=255)                                                                             aaGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCTTCTGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGa                                                                 <  3:107206/149‑1 (MQ=255)                                                                                 gccattatttccggctcggtctatggcaccgccgaagaagtcgcccgtcatgctgaatcgctgctCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGagca                                                              >  2:51694‑M1/66‑148 (MQ=255)                                                                                   cattatttccggctcggtctatggcaccgccgaagaagtcgcccgtcatgctgaatcgctgctCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCt                                                                    >  6:299365‑M1/64‑140 (MQ=255)                                                                                   cattatttccggctcggtctatggcaccgccgaagaagtcgcccgtcatgctgaatcgctgctCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCt                                                                    <  5:299365‑M1/77‑1 (MQ=255)                                                                                     tGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGAt                                                         >  4:103306/1‑149 (MQ=255)                                                                                         cAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAg                                                     >  2:104018/1‑149 (MQ=255)                                                                                                 tGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGACgg                                             >  7:72091/1‑149 (MQ=255)                                                                                                         tCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGACGGGCGActtc                                     <  3:103306/149‑1 (MQ=255)                                                                                                           cGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGACGGGCGActtctt                                   >  2:94056/1‑149 (MQ=255)                                                                                                             gCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTc                                                       <  1:198055/127‑1 (MQ=255)                                                                                                             gCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTc                                                       >  2:198055/1‑127 (MQ=255)                                                                                                             gCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGACGGGCGACTTCTTcg                                 >  5:30208/1‑149 (MQ=255)                                                                                                                 cTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCa                                                      >  2:201483/1‑124 (MQ=255)                                                                                                                 cTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCa                                                      <  1:201483/124‑1 (MQ=255)                                                                                                                  tCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGACGGGCGACTTCTTCGGCGGt                            >  1:147720/1‑149 (MQ=255)                                                                                                                    aCCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGACGGGCGACTTCTTCGGCGGTGc                          >  7:73109/1‑149 (MQ=255)                                                                                                                      ccATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGc                                                    <  5:304532/121‑1 (MQ=255)                                                                                                                      ccATGACGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGc                                                    >  6:304532/1‑121 (MQ=255)                                                                                                                        aTGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGACGGGCGACTTCTTCGGCGGTGCCa                        >  8:30996/1‑147 (MQ=255)                                                                                                                        aTGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGACGGGCGACTTCTTCGGCGGTGCCATa                      >  5:286611/1‑149 (MQ=255)                                                                                                                          gCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCATGAAGGGTGGAACGCGCAGCATGCCAGGCCTAGAACCCCGCCGCAATGAGCAGCGATACAGCAAAACGGGCGACAACTACGGCGGGGCCATaag                    >  8:198281/1‑147 (MQ=255)                                                                                                                                   agagGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGACGGGCGACTTCTTCGGCGGTGCCATAGACCGAGCCg            >  1:301969/1‑148 (MQ=255)                                                                                                                                   agagGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGACGGGCGACTTCTTCGGCGGTGCCATAGACCGAGCCg            >  1:297272/1‑148 (MQ=255)                                                                                                                                     agGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGACGGGCGACTTCTTCGGCGGTGCCATAGACCGAGCCGGaa         <  2:301969/149‑1 (MQ=255)                                                                                                                                      ggTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGACGGGCGACTTCTTCGGCGGTGCCATAGACCGAGCCGGaa         <  2:297272/148‑1 (MQ=255)                                                                                                                                       gTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGACGGGCGACTTCTTCGGCGGTGCCATAGACCGAGCCGGaaa        >  8:60408/1‑148 (MQ=255)                                                                                                                                        tCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGACGGGCGACTTCTTCGGCGGTGCCATAGACCGAGCCGGAaat       >  3:73135/1‑148 (MQ=255)                                                                                                                                          aCGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGACGGGCGACTTCTTCGGCGGTGCCATAGACCGAGCCGGAaataat    >  5:41627/1‑149 (MQ=255)                                                                                                                                            ggCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGACGGGCGACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATgg  >  5:200341/1‑149 (MQ=255)                                                                                                                                                aGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGACGGGCGACTTCTTCGGCGGTGCCATAGACCGAGc              <  6:276771/133‑1 (MQ=255)                                                                                                                                                aGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGACGGGCGACTTCTTCGGCGGTGCCATAGACCGAGc              >  5:276771/1‑133 (MQ=255)                                                                                                                                                 gCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGt                                                                                                          <  7:236820/40‑1 (MQ=255)                                                                                                                                                 gCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGt                                                                                                          >  8:236820/1‑40 (MQ=255)                                                                                                                                                  |                                                                                                                                               TATCGCCGTAGCTGGAGTCGCCCAAGGCGATCACCGCGCCAGGCAGGCCGCGCCAGGCCGCAGGCAGTGTGTCACGAAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGACGGGCGACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGG  >  NC_002947/5252219‑5252506

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.