New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5252364 =	54 (1.090)	6 (0.130)	6/242	NT	9.4%	coding (153/456 nt)	PP_4628	hypothetical protein
	?	NC_002947	5252443 =	65 (1.390)					coding (74/456 nt)	PP_4628	hypothetical protein

AAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAGTGAAAACGTAGGATACTAGCATTCAACGCTGGCAAAAGGCCGCC  >  NC_002947/5252295‑5252584                                                                                                                                                     |                                                                                                                                                   aaGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCTTCTGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGa                                                                                                                                                    <  3:107206/149‑1 (MQ=255)     gccattatttccggctcggtctatggcaccgccgaagaagtcgcccgtcatgctgaatcgctgctCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGagca                                                                                                                                                 >  2:51694‑M1/66‑148 (MQ=255)         tGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGAt                                                                                                                                            >  4:103306/1‑149 (MQ=255)             cAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAg                                                                                                                                        >  2:104018/1‑149 (MQ=255)                     tGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑gg                                                                                                                               >  7:72091/1‑149 (MQ=255)                             tCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑Acttc                                                                                                                   <  3:103306/149‑1 (MQ=255)                               cGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑Acttctt                                                                                                                 >  2:94056/1‑149 (MQ=255)                                 gCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTc                                                                                                                                          <  1:198055/127‑1 (MQ=255)                                 gCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTc                                                                                                                                          >  2:198055/1‑127 (MQ=255)                                 gCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTcg                                                                                                               >  5:30208/1‑149 (MQ=255)                                     cTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCa                                                                                                                                         <  1:201483/124‑1 (MQ=255)                                     cTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCa                                                                                                                                         >  2:201483/1‑124 (MQ=255)                                      tCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGt                                                                                                          >  1:147720/1‑149 (MQ=255)                                        aCCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGc                                                                                                        >  7:73109/1‑149 (MQ=255)                                          ccATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGc                                                                                                                                       <  5:304532/121‑1 (MQ=255)                                          ccATGACGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGc                                                                                                                                       >  6:304532/1‑121 (MQ=255)                                            aTGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCa                                                                                                      >  8:30996/1‑147 (MQ=255)                                            aTGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATa                                                                                                    >  5:286611/1‑149 (MQ=255)                                              gCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCATGAAGGGTGGAACGCGCAGCATGCCAGGCCTAGAACCCCGCCGCAATGAGCAGCGATACAGCAAAAC‑GGG‑‑‑CG‑ACAACTACGGCGGGGCCATaag                                                                                                  >  8:198281/1‑147 (MQ=255)                                                       agagGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCg                                                                                          >  1:301969/1‑148 (MQ=255)                                                       agagGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCg                                                                                          >  1:297272/1‑148 (MQ=255)                                                         agGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGaa                                                                                       <  2:301969/149‑1 (MQ=255)                                                          ggTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGaa                                                                                       <  2:297272/148‑1 (MQ=255)                                                           gTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGaaa                                                                                      >  8:60408/1‑148 (MQ=255)                                                            tCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAaat                                                                                     >  3:73135/1‑148 (MQ=255)                                                              aCGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAaataat                                                                                  >  5:41627/1‑149 (MQ=255)                                                                ggCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATgg                                                                                >  5:200341/1‑149 (MQ=255)                                                                  tgctcaaggcggcggggttcgaggcctggcatgctgcgcgtgccacccttcaggatcttcagggctttgcccccgacgccttgAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGc                                                                               >  2:51694‑M2/84‑148 (MQ=255)                                                                    aGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGc                                                                                            <  6:276771/133‑1 (MQ=255)                                                                    aGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGc                                                                                            >  5:276771/1‑133 (MQ=255)                                                                        aggcggcggggttcgaggcctggcatgctgcgcgtgccacccttcaggatcttcagggctttgcccccgacgccttgAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATg                                                                                 >  6:299365‑M2/78‑140 (MQ=255)                                                                        aggcggcggggttcgaggcctggcatgctgcgcgtgccacccttcaggatcttcagggctttgcccccgacgccttgAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATg                                                                                 <  5:299365‑M2/63‑1 (MQ=255)                                                                         ggcggcggggttcgaggcctggcatgctgcgcgtgccacccttcaggatcttcagggctttgcccccgacgccttgAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCa                                                                       >  6:267379‑M2/77‑149 (MQ=255)                                                                           CGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATc                                                                     >  1:104018‑M1/1‑149 (MQ=255)                                                                            gTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCACCTAATGGGAATGACAGGGAGCCG‑AATTATACGCCGTTCCAAAAGACCGAGCCGGAATTAATGGCGAAtta                                                                         >  1:102090/1‑147 (MQ=255)                                                                             tCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCgg                                                                   <  7:30996/149‑1 (MQ=255)                                                                             tCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCgg                                                                   <  8:72091/149‑1 (MQ=255)                                                                             tCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCgg                                                                   <  8:73109/149‑1 (MQ=255)                                                                                ggggCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTa                                                                <  6:286611/149‑1 (MQ=255)                                                                                    cAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTagag                                                             >  4:293507/1‑148 (MQ=255)                                                                                     aaaGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGa                                                           >  4:21981/1‑149 (MQ=255)                                                                                     aaaGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGa                                                           >  8:55519/1‑149 (MQ=255)                                                                                         cccTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACtt                                                                          >  2:34248/1‑130 (MQ=255)                                                                                         cccTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACtt                                                                          <  1:34248/130‑1 (MQ=255)                                                                                          ccTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCgg                                                                   <  7:102953/136‑1 (MQ=255)                                                                                          ccTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCgg                                                                   >  8:102953/1‑136 (MQ=255)                                                                                             gAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGaaa                                                   <  3:21981/149‑1 (MQ=255)                                                                                              aaGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGATCAGCGATTCAGCATGAC‑GGG‑‑‑CGCTCTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGa                                                     <  1:94056/147‑1 (MQ=255)                                                                                                 aTCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACt                                                 >  3:156692/1‑147 (MQ=255)                                                                                                  tCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAg                                              <  6:30208/149‑1 (MQ=255)                                                                                                  tCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAg                                              <  6:200341/149‑1 (MQ=255)                                                                                                   ctgcgcgtgccacccttcaggatcttcagggctttgcccccgacgccttgAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAg                                              <  5:267379‑M2/98‑1 (MQ=255)                                                                                                    cTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAGt                                             >  5:126175/1‑148 (MQ=255)                                                                                                     tGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATTGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAGTg                                            >  8:135799/1‑148 (MQ=255)                                                                                                     tGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAGTg                                            >  3:80181/1‑148 (MQ=255)                                                                                                     tGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAGTg                                            >  5:134422/1‑148 (MQ=255)                                                                                                     tGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAGTg                                            >  7:249774/1‑148 (MQ=255)                                                                                                         gggTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAGTGAAAAc                                       <  3:293507/149‑1 (MQ=255)                                                                                                            ccacccttcaggatcttcagggctttgcccccgacgccttgAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAGTGAAAACGTa                                    <  1:51694‑M2/108‑1 (MQ=255)                                                                                                              gCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAGTGAAAACGTAgg                                  <  4:73135/149‑1 (MQ=255)                                                                                                                aCGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGt                                                                 <  2:314048/116‑1 (MQ=255)                                                                                                                aCGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGt                                                                 >  1:314048/1‑116 (MQ=255)                                                                                                                aCGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAg                                              >  3:173146/1‑135 (MQ=255)                                                                                                                aCGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAg                                              <  4:173146/135‑1 (MQ=255)                                                                                                                    gcagcaTGCCAGGCCTCGAACCCCGCCGGCGTGAGCAGCGATTCATGATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGTATTCCGAAACTGAGTGAAAACGTAGGATACTa                            <  2:102090/149‑1 (MQ=255)                                                                                                                    gcagcaTGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAGTGAAAACGTAGGATACTa                            <  3:139397/149‑1 (MQ=255)                                                                                                                    gcagcaTGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAGTGAAAACGTAGGATACTa                            <  7:55519/149‑1 (MQ=255)                                                                                                                              aGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAGTGAAAACGTAGGATACTAGCATTCAACg                  >  6:186431/1‑149 (MQ=255)                                                                                                                                 ccTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAGTGAAAACGTAGGATACTAGCATTCAACGCTg               >  6:314391/1‑149 (MQ=255)                                                                                                                                 ccTCGAACCCCGACTCATTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑AG‑ACTTCTTCGGCTGTGCCATAGACCGAGGCGGAAATAATGGCTACTTTCATCGGGTAGAGGATTCCGAAACTGAGTGAAAACGTAGGATACTAGCATTCAACGCTg               <  7:135799/149‑1 (MQ=255)                                                                                                                                  cTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAGTGAAAACGTAGGATACTAGCATTCAACGCTgg              >  6:317919/1‑149 (MQ=255)                                                                                                                                  cTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAGTGAAAACGTAGGATACTAGCATTCAACGCTgg              <  6:134422/149‑1 (MQ=255)                                                                                                                                  cTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAGTGAAAACGTAGGATACTAGCATTCAACGCTgg              <  5:314391/149‑1 (MQ=255)                                                                                                                                        ccccGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAGTGAAAACGTAGGATACTAGCATTCAACGCTGGCAAAAg        <  7:60408/149‑1 (MQ=255)                                                                                                                                           cgccgcCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCggg                                                                  >  7:19542/1‑88 (MQ=255)                                                                                                                                           cgccgcCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCggg                                                                  <  8:19542/88‑1 (MQ=255)                                                                                                                                              cgccttgAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAGTGAAAACGTAGGATACTAGCATTCAACGCTGGCAAAAGgccgcc  <  4:80181‑M2/142‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   AAGGGTGCTGTACAGCGGCATGAGGTTGTCCGGCAACTCACCCATGCCGGTGGTAGAGGTCACGGCCAGCAAGGCGTCGGGGGCAAAGCCCTGAAGATCCTGAAGGGTGGCACGCGCAGCATGCCAGGCCTCGAACCCCGCCGCCTTGAGCAGCGATTCAGCATGAC‑GGG‑‑‑CG‑ACTTCTTCGGCGGTGCCATAGACCGAGCCGGAAATAATGGCGACTTTCATCGGGTAGAGGATTCCGAAACTGAGTGAAAACGTAGGATACTAGCATTCAACGCTGGCAAAAGGCCGCC  >  NC_002947/5252295‑5252584

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.