New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5380827	58 (1.170)	3 (0.060)	3/242	NT	5.5%	coding (129/537 nt)	bamE	outer membrane protein assembly factor BamE
	?	NC_002947	= 5380868	49 (1.050)					coding (170/537 nt)	bamE	outer membrane protein assembly factor BamE

TGGAAGTCGCCCACCGATGCAAAACACCAAGCTCTTGCTAACCAGCCTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGATTACCTGTACAGCCTGCAGCCTGGTGGCGGTAAACGTCAGCAAGAACGCATGAGT  >  NC_002947/5380683‑5380974                                                                                                                                                 |                                                                                                                                                    tGGAAGTCGCCCACCGATGCAAAACACCAAGCTCTTGCTAACCAGCCTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGAc                                                                                                                                                  >  5:195111/1‑148 (MQ=255)   gAAGTCGCCCACCGATGCAAAACACCAAGCTCTTGCTAACCAGCCTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCaa                                                                                                                                               >  3:41447/1‑149 (MQ=255)         gCCCACCGATGCAAAACACCAAGCTCTTGCTAACCAGCCTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGc                                                                                                                                         >  6:152170/1‑149 (MQ=255)           ccACCGATGCAAAACACCAAGCTCTTGCTAACCAGCCTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGccc                                                                                                                                       >  7:261382/1‑149 (MQ=255)             aCCGATGCAAAACACCAAGCTCTTGCTAACCAGCCTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCCCGCAAGACATGATAGACCAATTACGCCCgg                                                                                                                                     >  3:286389/1‑149 (MQ=255)                     aaaaCACCAAGCTCTTGCTAACCAGCCTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGAcc                                                                                                                             >  6:196566/1‑149 (MQ=255)                     aaaaCACCAAGCTCTTGCTAACCAGCCTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGAcc                                                                                                                             >  6:192056/1‑149 (MQ=255)                     aaaaCACCAAGCTCTTGCTAACCAGCCTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGAcc                                                                                                                             >  2:13827/1‑149 (MQ=255)                      aaaCACCAAGCTCTTGCTAACCAGCCTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGAccc                                                                                                                            <  4:222567/149‑1 (MQ=255)                            cAAGCTCTTGCTAACCAGCCTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCgg                                                                                                                       >  7:82498/1‑148 (MQ=255)                                     gCTAACCAGCCTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAaaccttacttgccggcgggtcattcccgggcgtaattggt                                                                                                             >  8:121626‑M1/1‑109 (MQ=255)                                       tAACCAGCCTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAAt                                                                                                                                 >  1:199152/1‑127 (MQ=255)                                       tAACCAGCCTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAAt                                                                                                                                 <  2:199152/127‑1 (MQ=255)                                       tAACCAGCCTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGtt                                                                                                            >  1:259508/1‑148 (MQ=255)                                            aGCCTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTtatcat                                                                                                      <  1:170443‑M2/149‑7 (MQ=255)                                             gCCTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTtatcatg                                                                                                     >  8:82498‑M2/1‑142 (MQ=255)                                             gCCTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTtatcatg                                                                                                     >  4:41447‑M2/1‑142 (MQ=255)                                             gCCTCACCCTAGTGGGACTGCTCGCACTCCCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTtatcatg                                                                                                     >  2:121216‑M2/1‑142 (MQ=255)                                              ccTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATgg                                                                                                    <  5:192056/149‑1 (MQ=255)                                              ccTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATgg                                                                                                    <  5:196566/149‑1 (MQ=255)                                               cTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATggg                                                                                                   >  3:74235/1‑149 (MQ=255)                                                 cACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAaaccttacttgccggcgggtcattcccgggcgtaattggtctatcatgtctt                                                                                                 <  7:135944‑M1/149‑53 (MQ=255)                                                   cccTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAaaccttacttgccggcgggtcattcccgggcgtaattggtctatcatgtcttgc                                                                                               <  7:121626‑M1/149‑55 (MQ=255)                                                    ccTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAAcc                                                                                              >  3:288389/1‑149 (MQ=255)                                                    ccTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATAATGGGCAAcc                                                                                              >  5:25209/1‑149 (MQ=255)                                                        gTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATTATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCt                                                                                          <  4:20815/149‑1 (MQ=255)                                                            gACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGa                                                                                                                               >  4:84775/1‑108 (MQ=255)                                                            gACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGa                                                                                                                               <  3:84775/108‑1 (MQ=255)                                                                  tCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCAGCTGATTCAGGa                                                                                 >  7:65372/1‑148 (MQ=255)                                                                      aCTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACtt                                                                            <  2:132260/149‑1 (MQ=255)                                                                        tCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAGCCCGCTGATTCAGGACACtgt                                                                           >  8:109241/1‑146 (MQ=255)                                                                          gCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTc                                                                          <  2:158058/147‑1 (MQ=255)                                                                                  cTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAg                                                                                   <  3:227962/130‑1 (MQ=255)                                                                                  cTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAg                                                                                   >  4:227962/1‑130 (MQ=255)                                                                                   tCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCg                                                               >  8:139729/1‑149 (MQ=255)                                                                                   tCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGCACACATTCAACACCAATCg                                                               >  1:306312/1‑149 (MQ=255)                                                                                     gTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGtt                                                             <  2:259508/149‑1 (MQ=255)                                                                                     gTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGtt                                                             <  8:65372/149‑1 (MQ=255)                                                                                      tttCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTg                                                            <  8:261382/149‑1 (MQ=255)                                                                                          ccGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGtt                                                             <  1:272356/144‑1 (MQ=255)                                                                                          ccGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGtt                                                             >  2:272356/1‑144 (MQ=255)                                                                                          ccGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGa                                                         <  6:25209/148‑1 (MQ=255)                                                                                           cGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGAt                                                        >  2:46080/1‑148 (MQ=255)                                                                                              ggTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGATTAcc                                                    <  6:195111/149‑1 (MQ=255)                                                                                                 ttACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGATTACCTg                                                  >  2:203974/1‑148 (MQ=255)                                                                                                  tACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGa                                                         <  2:69966/140‑1 (MQ=255)                                                                                                  tACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGa                                                         >  1:69966/1‑140 (MQ=255)                                                                                                   aCAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACccgccg                                                                                                                        <  8:182873/76‑1 (MQ=255)                                                                                                   aCAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACccgccg                                                                                                                        >  7:182873/1‑76 (MQ=255)                                                                                                      aaaTCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGATTACCTGTAcagc                                            <  1:46080/149‑1 (MQ=255)                                                                                                            aCATCCAGCAGGGCAAAGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATGATGGGCAACCCGCTGATTCAGGACACTTTCAACACAAATCGTTGGGATTACCTGTAcagcctgcag                                      >  2:82749/1‑149 (MQ=255)                                                                                                             cATGCAGCAGGGCTATGTCGTGACGCAAGACATGATAGACGTATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTTTCATGGGCAACGCGCTGATTCAGGACACTTTCAACAGCAATCGTTGGGATTAc                                                     <  5:61696/133‑1 (MQ=255)                                                                                                             cATCCAGCAGGGCAATGTCCTCACGCAAGACATGATAGACCAAATACGCACGGGAATGACACGCCTGCAAGAAAGCTTTATCATGGGCAACCCGCTGATTCACGACACTTACAACACCAAACGTTGGGAATAc                                                     >  6:61696/1‑133 (MQ=255)                                                                                                              aTCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGATTACCTGTAcagcctgcagcc                                    >  1:133975/1‑149 (MQ=255)                                                                                                                ccAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGATTACCTGTAcagcctgcagcctg                                  >  8:130279/1‑149 (MQ=255)                                                                                                                  agcagGGGAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTggg                                                          <  8:277280/123‑1 (MQ=255)                                                                                                                  agcagGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTggg                                                          >  7:277280/1‑123 (MQ=255)                                                                                                                      gggCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGATTACCTGTACAGCCTGCAGCCTGGTGGCg                            <  4:288389/149‑1 (MQ=255)                                                                                                                      gggCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGATTACCTGTACAGCCTGCAGCCTGGTGGCg                            <  2:170443/149‑1 (MQ=255)                                                                                                                            tGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGATTACCTGTACAGCCTGCAGCCTGGTGGCGGTAAAc                      <  7:139729/149‑1 (MQ=255)                                                                                                                            tGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGATTACCTGTACAGCCTGCAGCCTGGTGGCGGTAAAc                      <  4:74235/149‑1 (MQ=255)                                                                                                                                gtcACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGATTACCTGTACAGCCTGCAGCCTGGTGGCGGTAAACGTc                   <  2:306312/148‑1 (MQ=255)                                                                                                                                gtcACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGATTACCTGTACAGCCTGCAGCCTGGTGGCGGTAAACGTCa                  <  1:203974/149‑1 (MQ=255)                                                                                                                                     gCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTtatcatgtcttgcgtgacgacattgccctgctggatgtcgattttgtaaaccccgggaaacgagcaaccggcgagtgcgagcagtcccactaggg             <  7:121626‑M2/149‑96 (MQ=255)                                                                                                                                     gCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGATTACCTGTACAGCCTGCAGCCTGGTGGCGGTAAACGTCAGc                >  5:71686/1‑146 (MQ=255)                                                                                                                                       aaGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTtatcatgtcttgcgtgacgacattgccctgctggatgtcgattttgtaaaccccgggaaacgagcaaccggcgagtgcgagcagtcccactagggtg           <  7:135944‑M2/149‑98 (MQ=255)                                                                                                                                       aaGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGATTACCTGTACAGCCTGCAGCCTGGTGGCGGTAAACGTCAGCAAGaa           >  3:4885/1‑149 (MQ=255)                                                                                                                                       aaGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGATGACCTGTACCGCCTGCCGCCTGGTGGCGGTAAACGTCAGCAAGac           >  4:114772/1‑148 (MQ=255)                                                                                                                                           cATGATAaaccttacttgccggcgggtcattcccgggcgtaattggtctatcatgtcttgcgtgacgacattgccctgctggatgtcgattttgtaaaccccgggaaacgagcaaccggggagtgcgagcagtcccactagggtgaggc       >  2:121216‑M1/1‑7 (MQ=255)                                                                                                                                           cATGATAaaccttacttgccggcgggtcattcccgggcgtaattggtctatcatgtcttgcgtgacgacattgccctgctggatgtcgattttgtaaaccccgggaaacgagcaaccggcgagtgcgagcagtcccactagggtgaggc       >  4:41447‑M1/1‑7 (MQ=255)                                                                                                                                           cATGATAaaccttacttgccggcgggtcattcccgggcgtaattggtctatcatgtcttgcgtgacgacattgccctgctggatgtcgattttgtaaaccccgggaaacgagcaaccggcgagtgcgagcagtcccactagggtgaggc       >  8:82498‑M1/1‑7 (MQ=255)                                                                                                                                            aTGATAaaccttacttgccggcgggtcattcccgggcgtaattggtctatcatgtcttgcgtgacgacattgccctgctggatgtcgattttgtaaaccccgggaaacgagcaaccggcgagtgcgagcagtcccactagggtgaggct      <  1:170443‑M1/149‑144 (MQ=255)                                                                                                                                              gATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGATTACCTGTACAGCCTGCAGCCTGGTGGCGGTAAACGTCAGCAAGAACGCAt      >  3:7726/1‑147 (MQ=255)                                                                                                                                               aTAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGATTATTCAGGACACTTTCAACACCAATCGTTGGGATTACCTGTACAGCCTGCAGCCTGGTGGCGGTAAACGTCAGCAAGAACGCATGa    <  7:130279/148‑1 (MQ=255)                                                                                                                                                tAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGATTACCTGTACAGCCTGCAGCCTGGTGGCGGTAAACGTCAGCAAGAACGCATGAgt  >  2:25239/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                                    TGGAAGTCGCCCACCGATGCAAAACACCAAGCTCTTGCTAACCAGCCTCACCCTAGTGGGACTGCTCGCACTCGCCGGTTGCTCGTTTCCCGGGGTTTACAAAATCGACATCCAGCAGGGCAATGTCGTCACGCAAGACATGATAGACCAATTACGCCCGGGAATGACCCGCCGGCAAGTAAGGTTTATCATGGGCAACCCGCTGATTCAGGACACTTTCAACACCAATCGTTGGGATTACCTGTACAGCCTGCAGCCTGGTGGCGGTAAACGTCAGCAAGAACGCATGAGT  >  NC_002947/5380683‑5380974

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.