New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6117218 =	46 (0.930)	4 (0.090)	4/244	NT	8.7%	intergenic (+26/+86)	lpd/PP_5367	dihydrolipoyl dehydrogenase/transketolase domain‑containing protein
	?	NC_002947	6117252 =	40 (0.850)					intergenic (+60/+52)	lpd/PP_5367	dihydrolipoyl dehydrogenase/transketolase domain‑containing protein

TCGCCCTCACCTGCCACCCGCACCCGACGCGCTCCGAGGCCCTGCGCCAGGCGGCGATGAATGTGGATGGCATGGCCATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATGCAGCGTCGGCAGAGCGCCAGCATCGAGGAAGGCATCG  >  NC_002947/6117104‑6117400                                                                                                                                                     |                                                                                                                                                     tCGCCCTCACCTGCCACCCGCACCCGACGCGCTCCGAGGCCCTGCGCCAGGCGGCGATGAATGTGGATGGCATGGCCATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATa                                                                                                                                                      >  1:168087/1‑149 (MQ=255)   gCCCTCACCTGCCACCCGCACCCGACGCGCTCCGAGGCCCTGCGCCAGGCGGCGATGAATGTGGATGGCATGGCCATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATa                                                                                                                                                      >  3:112909/1‑147 (MQ=255)     tgaccgctacggtatctccaccgatgcagtgagcgcgcagatcaaggcttggctgtgacgtgatgcctgaagatagagccggccggaattaaaggcggctctatccctgtATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAgg                                                                                                                                                  >  8:19097‑M1/111‑149 (MQ=255)     tgaccgctacggtatctccaccgatgcagtgagcgcgcagatcaaggcttggctgtgacgtgatgcctgaagatagagccggccggaattaaaggcggctctatccctgtATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAgg                                                                                                                                                  <  7:19097‑M1/39‑1 (MQ=255)      cTCACCTGCCACCCGCACCCGACGCGCTCCGAGGCCCTGCGCCAGGCGGCGATGAATGTGGATGGCATGGCCATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAgg                                                                                                                                                  >  1:129758/1‑148 (MQ=255)           cTGCCACCCGCACCCGACGCGCTCCGAGGCCCTGCGCCAGGCGGCGATGAATGTGGATGGCATGGCCATGCAAATCTGAGGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGa                                                                                                                                                >  2:118379/1‑145 (MQ=255)           cTGCCACCCGCACCCGACGCGCTCCGAGGCCCTGCGCCAGGCGGCGATGAATGTGGATGGCATGGCCATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGa                                                                                                                                                <  1:118379/145‑1 (MQ=255)                  ccgcacccgACGCGCTCCGAGGCCCTGCGCCAGGCGGCGATGAATGTGGATGGCATGGCCATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCt                                                                                                                                     >  1:303644/1‑149 (MQ=255)                    gcacccgACGCGCTCCGAGGCCCTGCGCCAGGCGGCGATGAATGTGGATGGCATGGCCATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCtt                                                                                                                                    >  6:68930/1‑148 (MQ=255)                                cTCCGAGGCCCTGCGCCAGGCGGCGATGAATGTGGATGGCATGGCCATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTccggccgg                                                                                                                       >  6:274123/1‑149 (MQ=255)                                 tCCGAGGCCCTGCGCCAGGCGGCGAAGAATGTGGATGGCATGGCCATGCAAATCTGACGCGCCCCATTCGCTGCGTCAGGCCATGCCCATGCCTTCCGCATTTGCTTTGCGGGCATACAGGGAAAGAGCCGCCTTTAATTccggccgg                                                                                                                       >  1:272923/1‑148 (MQ=255)                                     gcgcccagatcaaggcttggctgtgacgtgatgcctgaagatagagccggccggaattaaaggcggctctatccctgtATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACa                                                                                                                                                    >  6:228067‑M1/79‑115 (MQ=255)                                     gcgcccagatcaaggcttggctgtgacgtgatgcctgaagatagagccggccggaattaaaggcggctctatccctgtATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACa                                                                                                                                                    <  5:228067‑M1/37‑1 (MQ=255)                                         ccTGCGCCAGGCGGCGATGAATGTGGATGGCATGGCCATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCtt                                                                                                              >  6:142709/1‑149 (MQ=255)                                                cAGGCGGCGATGAATGTGGATGGCATGGCCATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCa                                                                                                        >  3:251417/1‑148 (MQ=255)                                                        gATGAATGTGGATGGCATGGCCATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGctc                                                                                                                    >  7:3586/1‑128 (MQ=255)                                                        gATGAATGTGGATGGCATGGCCATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGctc                                                                                                                    <  8:3586/128‑1 (MQ=255)                                                               gtgGATGGCATGGCCATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGGTTTGCGGGCTTACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCGCTATCTTCAGGCATCACGTCACCGCCAAg                                                                                        >  6:180309/1‑149 (MQ=255)                                                                tgGATGGCATGGCCATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGc                                                                                       <  2:66222/149‑1 (MQ=255)                                                                   atggcatggcCATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCtt                                                                                    <  5:68930/149‑1 (MQ=255)                                                                      gcatggcCATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGa                                                                                  <  5:142709/148‑1 (MQ=255)                                                                       catggcCATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGc                                                                                       <  6:204908/142‑1 (MQ=255)                                                                       catggcCATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGc                                                                                       >  5:204908/1‑142 (MQ=255)                                                                       catggcCATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATc                                                                                >  3:190151/1‑149 (MQ=255)                                                                            ccATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTg                                                                                   >  7:110688/1‑141 (MQ=255)                                                                            ccATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTg                                                                                   <  8:110688/141‑1 (MQ=255)                                                                              aTGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGAt                                                                                 <  5:28555/141‑1 (MQ=255)                                                                              aTGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGAt                                                                                 >  6:28555/1‑141 (MQ=255)                                                                               tGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCt                                                                        >  4:83816/1‑149 (MQ=255)                                                                                  aaaTCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCaa                                                                                         <  7:7517/129‑1 (MQ=255)                                                                                  aaaTCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCaa                                                                                         >  8:7517/1‑129 (MQ=255)                                                                                  aaaTCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCAc                                                                     <  8:43874/149‑1 (MQ=255)                                                                                  aaaTCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCAc                                                                     <  2:303644/149‑1 (MQ=255)                                                                                           gAGCCGCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCGGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGt                                                            <  2:272923/149‑1 (MQ=255)                                                                                              ccccATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGga                                                         <  2:129758/149‑1 (MQ=255)                                                                                                 cATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGgaga                                                       >  4:111401/1‑148 (MQ=255)                                                                                                       cTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCg                                                  >  1:195603/1‑147 (MQ=255)                                                                                                              cctgtatgcccgcaaagcaaatgccgaaggcaagggcatACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCa                                         >  8:19097‑M2/40‑149 (MQ=255)                                                                                                              cctgtatgcccgcaaagcaaatgccgaaggcaagggcatACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCa                                         <  7:19097‑M2/110‑1 (MQ=255)                                                                                                                tgtatgcccgcaaagcaaatgccgaaggcaagggcatACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTgggcgc                                                                         <  5:228067‑M2/78‑1 (MQ=255)                                                                                                                tgtatgcccgcaaagcaaatgccgaaggcaagggcatACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTgggcgc                                                                         >  6:228067‑M2/38‑115 (MQ=255)                                                                                                                 ccATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATGc                                      <  4:190151/149‑1 (MQ=255)                                                                                                                  cATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTTGAGATACCGTAGCGGTCATGCa                                     <  2:168087/149‑1 (MQ=255)                                                                                                                  cATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATg                                       >  6:34463/1‑147 (MQ=255)                                                                                                                  cATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATGCa                                     <  6:318202/149‑1 (MQ=255)                                                                                                                      CCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTCATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATGCAGCGt                                 >  4:112909‑M1/1‑149 (MQ=255)                                                                                                                       ccTTGCCTTAGGCATTTGCTTTGCGGGCTAACAGGGATAGAGCCGCCTTTAATTCCGGCAGGCTCTATATTCAGGCATAACTTCAAAGCCAAGCCTTGATCTGCGCGCTAAATGCATCGTTGGAGATACCGTATCGGTCATGCAGCGTc                                >  1:180303/1‑149 (MQ=255)                                                                                                                             cTTCGGCATTTGCTTTGCGGGCGTACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATGCAGCGTCGGCa                            >  2:211283/1‑147 (MQ=255)                                                                                                                              ttCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATGCAGCGTCGGCagag                         >  8:159340/1‑149 (MQ=255)                                                                                                                                cGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATGCAGCGTCGGCAGAgcg                       >  8:152514/1‑149 (MQ=255)                                                                                                                                   cATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATGCAGCGTCGGCAGAGCGCCa                    <  2:288205/149‑1 (MQ=255)                                                                                                                                       tgctttgcGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATGCAGCGTCGGCAGAGCGCCAGCAt                >  1:113338/1‑149 (MQ=255)                                                                                                                                          tttgcGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACCTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATGCAGCGTCGGCAGAGCGCCAGCATCGa             <  4:251417/149‑1 (MQ=255)                                                                                                                                            tgcGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATGCAGCGTCGGCAGAGCGCCAGCATCGAg            <  2:113338/148‑1 (MQ=255)                                                                                                                                              cGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATGCAGCGTCGGCAGAGCGCCAGCATCGAGGaa         <  5:34463/149‑1 (MQ=255)                                                                                                                                              cGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATGCAGCGTCGGCAGAGCGCCAGCATCGAGGaa         <  3:111401/149‑1 (MQ=255)                                                                                                                                                   atACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATGCAGCGTCGGCAGAGCGCCAGCATCGAGGAAGGCAt    >  1:109835‑M2/3‑149 (MQ=255)                                                                                                                                                     aCAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGAATCGGTGGAGATACCGTAGCGGTCATGCAGCGTCGGCAGAGCGCCAGCATCGAGGAAGGCATCg  >  6:197242/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     TCGCCCTCACCTGCCACCCGCACCCGACGCGCTCCGAGGCCCTGCGCCAGGCGGCGATGAATGTGGATGGCATGGCCATGCAAATCTGACGAGCCCCATTCGCTGCGTCAGGCCATGCCCTTGCCTTCGGCATTTGCTTTGCGGGCATACAGGGATAGAGCCGCCTTTAATTCCGGCCGGCTCTATCTTCAGGCATCACGTCACAGCCAAGCCTTGATCTGCGCGCTCACTGCATCGGTGGAGATACCGTAGCGGTCATGCAGCGTCGGCAGAGCGCCAGCATCGAGGAAGGCATCG  >  NC_002947/6117104‑6117400

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.