New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 306450	44 (0.870)	3 (0.060)	3/244	NT	6.1%	coding (365/900 nt)	hslO	molecular chaperone HslO
	?	NC_002947	= 306488	50 (1.050)					coding (403/900 nt)	hslO	molecular chaperone HslO

CAGGCGCGTTCGGCCGGGCCGATTCCGCTGCTGATGGTGGAATGTTCCAGTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/306296‑306450 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatcgaGGTCGACGGTCCCCTGGTAGCGCTGGCCCTTGACCGGGTCGATGGTCAGGGTCAGGTGGCCGTCGGGCATCAGCTGCGACAGGGTGGCACCAGCCGGAATCTGGTCCGCTTCGTAGCGGGCCATGCCACGAATCTCGCGCTCAC  <  NC_002947/306488‑306345                                                                                                                                                                                                                                                                                                             CAGGCGCGTTCGGCCGGTCCGATTCCGCTGCTGATGGTGGAATGTTCCAGTGAGCGCGAGATTCGTTGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGAC                                                                                                                                                        <  4:104173/149‑1    GCGCGTTCGGCCGGGCCGATTCCGCTGCTGATGGTGGAATGTTCCAGTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCAT                                                                                                                                                     >  5:261228/1‑149                            CTGCTGATGGTGGAATGTTCCAGTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATC                                                                                                                                                    >  3:53281/1‑126                            CTGCTGATGGTGGAATGTTCCAGTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATC                                                                                                                                                    <  4:53281/126‑1                                                       CGCGAGATTCGTGGCATGGCCCGCTATGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGAGGTCGACGGTCCCCTGGTAGCGCTGGCCCTTGACCGGGTCGATGGTCA                                                                                                  <  6:258491/149‑1                                                                                  GAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGAGGTCGACGGTCCCCTGGTAGCGCTGGCCCTTGACCGGGTCGATGGTC                                                                                                   >  7:37536/1‑121                                                                                  GAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGAGGTCGACGGTCCCCTGGTAGCGCTGGCCCTTGACCGGGTCGATGGTC                                                                                                   <  8:37536/121‑1                                                                                                                                                       ATCGAGGTCGACGGTCCCCTGGTAGCGCTGGCCCTTGACCGGGTCGATGGTCAGGGTCAGGTGGCCGTCGGGCATCAGCTGCGACAGGGTGGCACCAGCCGGAATCTGGTCCGCTTCGTAGCGGGCCATGCCACGAATCTCGCGCTCAC  >  7:23989/1‑149                                                                                                                                                                                                                                                                                                             CAGGCGCGTTCGGCCGGGCCGATTCCGCTGCTGATGGTGGAATGTTCCAGTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/306296‑306450 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatcgaGGTCGACGGTCCCCTGGTAGCGCTGGCCCTTGACCGGGTCGATGGTCAGGGTCAGGTGGCCGTCGGGCATCAGCTGCGACAGGGTGGCACCAGCCGGAATCTGGTCCGCTTCGTAGCGGGCCATGCCACGAATCTCGCGCTCAC  <  NC_002947/306488‑306345

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.