New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 306450 | 44 (0.870) | 3 (0.060) | 3/244 | NT | 6.1% | coding (365/900 nt) | hslO | molecular chaperone HslO |
? | NC_002947 | = 306488 | 50 (1.050) | coding (403/900 nt) | hslO | molecular chaperone HslO |
GTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCCGTGGGCTATTGCTGCAGCAACTGCCACGTGATCGCCAGCCGGATG > NC_002947/306345‑306632 | gTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCtcgat > 7:23989‑M2/1‑144 (MQ=255) aGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGgc < 2:115462/149‑1 (MQ=255) gagaTTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCaa > 8:68115/1‑149 (MQ=255) agaTTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGgc > 8:67284/1‑143 (MQ=255) agaTTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGgc < 7:67284/143‑1 (MQ=255) agaTTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAAc < 7:185758/149‑1 (MQ=255) gTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACctctct > 1:305527/1‑149 (MQ=255) cGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAAcc < 4:222024/128‑1 (MQ=255) cGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAAcc > 3:222024/1‑128 (MQ=255) gAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTc > 8:60469/1‑141 (MQ=255) gAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTc < 7:60469/141‑1 (MQ=255) cGGACCAGATTGCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTc < 7:248752/149‑1 (MQ=255) aCCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTc < 4:379/149‑1 (MQ=255) aTTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTc > 4:296790/1‑149 (MQ=255) tCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCg > 5:10205/1‑148 (MQ=255) ccGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACACTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCg > 1:214833/1‑147 (MQ=255) cGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCgcag < 7:68115/149‑1 (MQ=255) ggCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCgcagc < 2:214833/149‑1 (MQ=255) gCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCgcag > 2:11657/1‑147 (MQ=255) tGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGt > 6:104213/1‑149 (MQ=255) tGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCt > 8:30588/1‑148 (MQ=255) gCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATg > 5:32655/1‑149 (MQ=255) gCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATg > 2:93099/1‑149 (MQ=255) ccGACGGCCACCTGACCCTGCCCATCGACCCGGGCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGcc > 5:108504/1‑149 (MQ=255) cGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGcc > 3:211089/1‑148 (MQ=255) cACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGttt > 6:202385/1‑86 (MQ=255) cACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGttt < 5:202385/86‑1 (MQ=255) cACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑Aggcgg < 8:97491/149‑1 (MQ=255) aCCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑Aggcgg > 7:155701/1‑148 (MQ=255) gaccctgaccATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGttt < 6:5521/123‑1 (MQ=255) gaccctgaccATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGttt > 5:5521/1‑123 (MQ=255) ctgaccATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCCg > 3:258614/1‑149 (MQ=255) tgaccATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCtcgatggtcagggtcaggtggccgtcgggcatcagctgcgacagggtggcaccagccggaatctggtccgcttcatagcgggccatgccacgaatctcgcg < 6:258491‑M2/149‑102 (MQ=255) gaccATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCtcgatggtcagggtcaggtggccgtcgggcatcagctgcgacagggtggcaccagccggaatctggtccgcttc > 7:37536‑M2/1‑47 (MQ=255) gaccATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCtcgatggtcagggtcaggtggccgtcgggcatcagctgcgacagggtggcaccagccggaatctggtccgcttc < 8:37536‑M2/121‑75 (MQ=255) aTCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGccc < 6:42860/127‑1 (MQ=255) aTCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGccc > 5:42860/1‑127 (MQ=255) aTCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑Agg < 3:145033/131‑1 (MQ=255) aTCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACAGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑Agg > 4:145033/1‑131 (MQ=255) cGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCTGTGGGCTAt > 4:144315/1‑149 (MQ=255) gACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCCGTGGGCTAtt < 7:30588/149‑1 (MQ=255) aCCCGGTCAAGGGCCAGCGCTACCAGGGGACCATCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACAAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCCGTGCGCTATtg > 2:293923/1‑149 (MQ=255) ccGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCC‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCCGTGGGCTATtgct < 3:296790/149‑1 (MQ=255) ggTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCCGTGGGCTATtgctgc > 7:246005/1‑149 (MQ=255) ggTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCCGTGGGCTATtgctg > 3:135038/1‑148 (MQ=255) gTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCCGTGGGCTATTGCTgca < 2:305527/149‑1 (MQ=255) gggCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCTCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCCGTGGGCTATTGCTGCAGCAAc < 3:81742/149‑1 (MQ=255) gggCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCCGTGGGCTATtgctgc < 5:213775/143‑1 (MQ=255) gggCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCCGTGGGCTATtgctgc > 6:213775/1‑143 (MQ=255) gggCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCCGTGGGCTATTGCTGCAGCAAc > 8:6052/1‑149 (MQ=255) ggCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCCGTGGGCTATTGCTGCAGCAACt < 4:258614/149‑1 (MQ=255) ggCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCCGTGGGCTATTGCTGCAGCAACt > 2:306138/1‑149 (MQ=255) ggCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCCGTGGGCTATTGCTGCAGCAACt < 8:155701/149‑1 (MQ=255) ggCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCCGTGGGCTATTGCTGCAGCAACt < 6:32655/149‑1 (MQ=255) gCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCCGTGGGCTATTGCTGCAGCAACTg > 8:50682/1‑149 (MQ=255) cAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCTGTGGGCTATTGCTGCAGCAACTGcc < 3:144315/149‑1 (MQ=255) gACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCTGGAGAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCCGTGGGCTATTGCTGCAGCAACTGCCACGTGATCGc > 1:100284/1‑148 (MQ=255) cGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCCGTGGGCTATTGCTGCAGCAACTGCCACGTGATCGCCAGCCGgat > 7:255657/1‑148 (MQ=255) gACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCGAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGTCTCAATGCCCA‑AGGCGGCAAGGCCCTTGGGCTATTGCTGCAGCAACTGCCACGTGATCGCCAGCCGgatg < 1:293923/148‑1 (MQ=255) gACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCATAGGCGGCAAGGCCCGTGGGCTATTGCTGCAGCAACTGCCACGTGATCGCCAGCCGgat < 1:93099/148‑1 (MQ=255) | GTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCT‑‑‑CAATACCCGTTTCTGGCTCAATGCCCA‑AGGCGGCAAGGCCCGTGGGCTATTGCTGCAGCAACTGCCACGTGATCGCCAGCCGGATG > NC_002947/306345‑306632 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |