New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 306450 | 44 (0.870) | 3 (0.060) | 3/244 | NT | 6.1% | coding (365/900 nt) | hslO | molecular chaperone HslO |
? | NC_002947 | = 306488 | 50 (1.050) | coding (403/900 nt) | hslO | molecular chaperone HslO |
TTCGGCCGGGCCGATTCCGCTGCTGATGGTGGAATGTTCCAGTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCTCAATACCCGTTTCTGGCTCAATGCCCAAGGCGGCAAGGCCCGTGGGCTATTG > NC_002947/306304‑306598 | ttCGGCCGGGCCGATTCCGCTGCTGATGGTGGAATGTTCCAGTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGAcc > 7:226875/1‑149 (MQ=255) aTTCCGCTGCTGATGGTGGAATGTTCCAGTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCa < 5:237873/149‑1 (MQ=255) aTTCCGCTGCTGATGGTGGAATGTTCCAGTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCa < 2:73719/149‑1 (MQ=255) cGCTGCTGATGGTGGAATGTTCCAGTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAgcg < 1:236248/148‑1 (MQ=255) ctgATGGTGGAATGTTCCAGTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTAc > 8:185758/1‑147 (MQ=255) aTGGTGGAATGTTCCAGTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAg < 5:96936/147‑1 (MQ=255) tggtggAATGTTCCAGTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGCCCATCGACCCGGTCAAGGGCCAGCGCTACCAgggg > 4:81742/1‑149 (MQ=255) tggAATGTTCCAGTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGAcc < 2:132062/149‑1 (MQ=255) tggAATGTTCCAGTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGAcc < 6:261228/149‑1 (MQ=255) aaTGTTCCAGTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTc < 8:275896/149‑1 (MQ=255) aTGTTCCAGTGAGAGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCTGCTGGTGCCACCCTGTCGCAGCTGATTCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGTACCGTc < 4:196937/148‑1 (MQ=255) ttCCAGTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCTGCGCTACCAGGGGACCGTCGAc < 8:226875/148‑1 (MQ=255) gTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCtcgat > 7:23989‑M2/1‑144 (MQ=255) aGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGgc < 2:115462/149‑1 (MQ=255) cgcgAGATTCGTGGCATGGCCCGCTATGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGAggtcgacggtcccctggtagcgctggcccttgaccgggtcgatggtca < 6:258491‑M1/149‑49 (MQ=255) gagaTTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCaa > 8:68115/1‑149 (MQ=255) agaTTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGgc < 7:67284/143‑1 (MQ=255) agaTTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGgc > 8:67284/1‑143 (MQ=255) agaTTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAAc < 7:185758/149‑1 (MQ=255) tCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAgg < 1:232993/119‑1 (MQ=255) tCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAgg > 2:232993/1‑119 (MQ=255) gTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACctctct > 1:305527/1‑149 (MQ=255) tGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGAcc < 6:296529/92‑1 (MQ=255) tGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGAcc > 5:296529/1‑92 (MQ=255) cGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAAcc < 4:222024/128‑1 (MQ=255) cGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAAcc > 3:222024/1‑128 (MQ=255) gAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGAggtcgacggtcccctggtagcgctggcccttgaccgggtcgatggtc < 8:37536‑M1/121‑48 (MQ=255) gAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGAggtcgacggtcccctggtagcgctggcccttgaccgggtcgatggtc > 7:37536‑M1/1‑74 (MQ=255) gAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTc < 7:60469/141‑1 (MQ=255) gAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTc > 8:60469/1‑141 (MQ=255) cGGACCAGATTGCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTc < 7:248752/149‑1 (MQ=255) aCCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTc < 4:379/149‑1 (MQ=255) aTTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTc > 4:296790/1‑149 (MQ=255) tCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCg > 5:10205/1‑148 (MQ=255) ccGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACACTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCg > 1:214833/1‑147 (MQ=255) cGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCgcag < 7:68115/149‑1 (MQ=255) ggCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCgcagc < 2:214833/149‑1 (MQ=255) gCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCgcag > 2:11657/1‑147 (MQ=255) tGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCTCAATACCCGt > 6:104213/1‑149 (MQ=255) tGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCTCAATACCCGTTTCTGGCt > 8:30588/1‑148 (MQ=255) gCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCTCAATACCCGTTTCTGGCTCAATg > 5:32655/1‑149 (MQ=255) gCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCTCAATACCCGTTTCTGGCTCAATg > 2:93099/1‑149 (MQ=255) ccGACGGCCACCTGACCCTGCCCATCGACCCGGGCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCTCAATACCCGTTTCTGGCTCAATGcc > 5:108504/1‑149 (MQ=255) cGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCTCAATACCCGTTTCTGGCTCAATGcc > 3:211089/1‑148 (MQ=255) cACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGttt < 5:202385/86‑1 (MQ=255) cACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGttt > 6:202385/1‑86 (MQ=255) cACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCTCAATACCCGTTTCTGGCTCAATGCCCAAggcgg < 8:97491/149‑1 (MQ=255) aCCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCTCAATACCCGTTTCTGGCTCAATGCCCAAggcgg > 7:155701/1‑148 (MQ=255) gaccctgaccATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCTCAATACCCGttt > 5:5521/1‑123 (MQ=255) gaccctgaccATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCTCAATACCCGttt < 6:5521/123‑1 (MQ=255) ctgaccATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCTCAATACCCGTTTCTGGCTCAATGCCCAAGGCGGCAAGGCCCg > 3:258614/1‑149 (MQ=255) tgaccATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCtcgatggtcagggtcaggtggccgtcgggcatcagctgcgacagggtggcaccagccggaatctggtccgcttcatagcgggccatgccacgaatctcgcg < 6:258491‑M2/149‑102 (MQ=255) gaccATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCtcgatggtcagggtcaggtggccgtcgggcatcagctgcgacagggtggcaccagccggaatctggtccgcttc > 7:37536‑M2/1‑47 (MQ=255) gaccATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCtcgatggtcagggtcaggtggccgtcgggcatcagctgcgacagggtggcaccagccggaatctggtccgcttc < 8:37536‑M2/121‑75 (MQ=255) aTCGAggtcgacggtcccctggtagcgctggcccttgaccgggtcgatggtcagggtcaggtggccgtcgggcatcagctgcgacagggtggcaccagccggaatctggtccgcttcgtagcgggccatgccacgaatctcgcgctcac > 7:23989‑M1/1‑5 (MQ=255) aTCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCTCAATACCCGTTTCTGGCTCAATGccc < 6:42860/127‑1 (MQ=255) aTCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCTCAATACCCGTTTCTGGCTCAATGccc > 5:42860/1‑127 (MQ=255) aTCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCTCAATACCCGTTTCTGGCTCAATGCCCAAgg < 3:145033/131‑1 (MQ=255) aTCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACAGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCTCAATACCCGTTTCTGGCTCAATGCCCAAgg > 4:145033/1‑131 (MQ=255) cGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCTCAATACCCGTTTCTGGCTCAATGCCCAAGGCGGCAAGGCCTGTGGGCTAt > 4:144315/1‑149 (MQ=255) gACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCTCAATACCCGTTTCTGGCTCAATGCCCAAGGCGGCAAGGCCCGTGGGCTAtt < 7:30588/149‑1 (MQ=255) aCCCGGTCAAGGGCCAGCGCTACCAGGGGACCATCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACAAACTACTTCGTCCAGTCGCAGCAGCTCAATACCCGTTTCTGGCTCAATGCCCAAGGCGGCAAGGCCCGTGCGCTATtg > 2:293923/1‑149 (MQ=255) | TTCGGCCGGGCCGATTCCGCTGCTGATGGTGGAATGTTCCAGTGAGCGCGAGATTCGTGGCATGGCCCGCTACGAAGCGGACCAGATTCCGGCTGGTGCCACCCTGTCGCAGCTGATGCCCGACGGCCACCTGACCCTGACCATCGACCCGGTCAAGGGCCAGCGCTACCAGGGGACCGTCGACCTCGATGGCGCCAACCTGTCTGAATGTTTCACCAACTACTTCGTCCAGTCGCAGCAGCTCAATACCCGTTTCTGGCTCAATGCCCAAGGCGGCAAGGCCCGTGGGCTATTG > NC_002947/306304‑306598 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |