New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	448271 =	71 (1.410)	4 (0.090)	4/240	NT	5.9%	coding (850/1284 nt)	PP_0369	diguanylate cyclase
	?	NC_002947	448347 =	61 (1.300)					coding (926/1284 nt)	PP_0369	diguanylate cyclase

GGCTTCCACATGCGGCACGCATTCCGCGGCGGTCTTGCCGGCGAACACCAGGGCGAACTCCTCCCCGCCATAACGGTAGGCACGGCCACCGCCGGTGACCTTGGACAAGCGGCTGGCGACCAACCGCAGCACCTGGTCACCGACATCGTGGCCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/448426‑448271 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggccgtgCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGAC  >  NC_002947/448347‑448489                                                                                                                                                                                                                                                                                                             GGCTTCCACATGCGGCACGCATTCCGCGGCGGTCTTGCCGGCGAACACCAGGGCGAACTCCTCCCCGCCATAACGGTAGGCACGGCCACCGCCGGTGACCTTGGACAAGCGGCTGGCGACCAACCGCAGCACCTGGTCACCGACATCGT                                                                                                                                                        <  3:244382/149‑1        ACATGCGGCACGCATTCCGCGGCGGTCTTGCCGGCGAACACCAGGGCGAACTCCTCCCCGCCATAACGGTAGGCACGGCCACCGCCGGTGACATTGGACAAGCGGCTGGCGACCAACCGCAGCCCCTGGTCACCGACATCGTTGCCGTG                                                                                                                                                 >  2:277905/1‑149         CATGCGGCACGCATTCCGCGGCGGTCTTGCCGGCGAACACCAGGGCGAACTCCTCCCCGCCATAACGGTAGGCACGGCCACCGCCGGTGACCTTGGACAAGCGGCTGGCGACCAACCGCAGCACCTGGTCACCGACATCGTG                                                                                                                                                       <  7:117569/142‑1         CATGCGGCACGCATTCCGCGGCGGTCTTGCCGGCGAACACCAGGGCGAACTCCTCCCCGCCATAACGGTAGGCACGGCCACCGCCGGTGACCTTGGACAAGCGGCTGGCGACCAACCGCAGCACCTGGTCACCGACATCGTG                                                                                                                                                       >  8:117569/1‑142                                                                               GGCACGGCCACCGCCGGTGACCTTGGACAAGCGGCTGGCGACCAACCGCAGCACCTGGTCACCGACATCGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCAT                                                                          >  7:244777/1‑149                                                                                GCACGGCCACCGCCGGTGACCTTGGACAAGCGGCTGGCGACCAACCGCAGCACCTGGTCACCGACATCGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATG                                                                         >  3:287618/1‑149                                                                                  ACGGCCACCGCCGGTGACCTTGGACAAGCGGCTGGCGACCAACCGCAGCACCTGGTCACCGACATCGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTG                                                                       >  1:226095/1‑149                                                                                                                                           ACCGACATCGTGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAA               <  4:287618/148‑1                                                                                                                                                     TGGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAG     >  4:299896/1‑148                                                                                                                                                      GGCCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCACTGGGGTTCGCCGGCAAGACCGCCGCGTAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGA   <  6:24680/149‑1                                                                                                                                                        CCGTGCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGAC  >  2:108497/1‑148                                                                                                                                                                                                                                                                                                             GGCTTCCACATGCGGCACGCATTCCGCGGCGGTCTTGCCGGCGAACACCAGGGCGAACTCCTCCCCGCCATAACGGTAGGCACGGCCACCGCCGGTGACCTTGGACAAGCGGCTGGCGACCAACCGCAGCACCTGGTCACCGACATCGTGGCCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/448426‑448271 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggccgtgCCTACCGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGAC  >  NC_002947/448347‑448489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.