| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 467139 | 48 (0.950) | 3 (0.060) | 3/246 | NT | 6.8% | noncoding (58/77 nt) | PP_t71 | tRNA‑Met |
| ? | NC_002947 | = 467161 | 37 (0.770) | noncoding (36/77 nt) | PP_t71 | tRNA‑Met | |||||
GCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATC‑GCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/466990‑467139‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggactcATAATCCTTTGGTCCACGGTTCGAGTCCGTGTGGGCCCACCAGATACGACAAAGCCGCGCGATTGCGCGGCTTTTTCATGCCCGCAAGAAATAAATGGTCAGGGGCGCGTACATCCAGCGCAGCGGCGCCGAGCGCATGACCTTG < NC_002947/467161‑467017 GCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCAGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGAC < 1:52598/149‑1GCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATC‑GCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACT > 5:259732/1‑149 ACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATC‑GCGCGGCTTTGTCGTATCTGGTGGGCCCACACG > 5:319193/1‑137 ACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATC‑GCGCGGCTTTGTCGTATCTGGTGGGCCCACACG < 6:319193/137‑1 TGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATC‑GCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCATAATCCTTTGGTCCACGGTTCGAGTCCGTGTGG < 5:214452/149‑1 GCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCATAATCCTTTGGTCCACGGTTCGAGTCCGTGT < 1:254994/68‑1 GCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCATAATCCTTTGGTCCACGGTTCGAGTCCGTGT > 2:254994/1‑68 ACTCATACTCCTTTGGTCCACGGTTCGCGTCCGTGTGGGCCCACCAGATACGACCACGCCGCGCGATTGCGCGGCTTTTTCATGCCCGCAAGAAATAAATGGTCAGGGGCGCGTACATCCAGCGCAGCGGCGCCGAGCGCATGACCTTG < 7:121465/149‑1 TCATAATCCTTTGGTCCACGGTTCGAGTCCGTGTGGGCCCACCAGATACGACAAAGCCGCGCGATTGCGCGGCTTTTTCATGCCCGCAAGAAATAAATGGTCAGGGGCGCGTACATCCAGCGCAGCGGCGCCGAGC < 7:51210/136‑1 TCATAATCCTTTGGTCCACGGTTCGAGTCCGTGTGGGCCCACCAGATACGACAAAGCCGCGCGATTGCGCGGCTTTTTCATGCCCGCAAGAAATAAATGGTCAGGGGCGCGTACATCCAGCGCAGCGGCGCCGAGC > 8:51210/1‑136 GCTGAGATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATC‑GCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/466990‑467139‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggactcATAATCCTTTGGTCCACGGTTCGAGTCCGTGTGGGCCCACCAGATACGACAAAGCCGCGCGATTGCGCGGCTTTTTCATGCCCGCAAGAAATAAATGGTCAGGGGCGCGTACATCCAGCGCAGCGGCGCCGAGCGCATGACCTTG < NC_002947/467161‑467017 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |