New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 467139 | 48 (0.950) | 3 (0.060) | 3/246 | NT | 6.8% | noncoding (58/77 nt) | PP_t71 | tRNA‑Met |
? | NC_002947 | = 467161 | 37 (0.770) | noncoding (36/77 nt) | PP_t71 | tRNA‑Met |
GATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCTGTGCCATCTGAAAGATCCGATAGTGCTATGCGAAGAAACGCGGCCGCGAA > NC_002947/466995‑467284 | gaTACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTATGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAAc < 8:193616/149‑1 (MQ=255) cctttttATCGCTAAGTCCCAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGAACATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTg < 4:239021/146‑1 (MQ=255) ttttAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGAc < 8:61817/149‑1 (MQ=255) ttttAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGAc > 1:243514/1‑149 (MQ=255) tttAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGAc < 1:316128/148‑1 (MQ=255) cTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGAt > 1:200512/1‑149 (MQ=255) cTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGAt < 7:90277/149‑1 (MQ=255) cTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTAt < 5:283350/149‑1 (MQ=255) cTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACAATTTATTTCTTGCGGGAATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAATGATTa < 4:54055/148‑1 (MQ=255) ttCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGt < 5:314336/133‑1 (MQ=255) ttCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGt > 6:314336/1‑133 (MQ=255) cAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCGTGGTCGTATCTGGTGGGCCCACACGGACGCGAACCGTGGACCAAAGGAGTATgagt < 7:121465‑M2/149‑5 (MQ=255) aTGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGc < 4:158450/149‑1 (MQ=255) tGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCataatcctttggtccacggttcgagtccgtgtgg < 5:214452‑M1/149‑35 (MQ=255) tGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGct > 5:51889/1‑149 (MQ=255) gcTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATga < 7:51210‑M2/136‑3 (MQ=255) gcTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATga > 8:51210‑M2/1‑134 (MQ=255) cTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTaa < 2:243514/149‑1 (MQ=255) cTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTaa < 1:119522/149‑1 (MQ=255) cgctgcgctgGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACt > 7:303899/1‑147 (MQ=255) ctgcgctgGATGTACGCGCCCCTGACCATTTATTTCTTGCGTGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGc < 6:259732/149‑1 (MQ=255) gcgctgGATGTACGCGCCCCTAACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCta > 6:159272/1‑149 (MQ=255) tACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCa < 2:200512/149‑1 (MQ=255) aCGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATGTGGTGGGCCCACACGGACTCGAACCGTg < 4:294677/96‑1 (MQ=255) aCGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTg > 3:294677/1‑96 (MQ=255) aCGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGTTTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCt > 2:99610/1‑146 (MQ=255) aCGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCct < 3:66685/117‑1 (MQ=255) aCGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCct > 4:66685/1‑117 (MQ=255) aCGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCa < 1:99610/148‑1 (MQ=255) cgcgCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGt < 6:148827/149‑1 (MQ=255) gcgcCCCTGGCCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGt > 8:258815/1‑148 (MQ=255) gACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCg > 5:268262/1‑149 (MQ=255) cATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGAt < 4:10707/149‑1 (MQ=255) ttatttCTTGCGAGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTAt < 6:208477/94‑1 (MQ=255) ttatttCTTGCGAGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTAt > 5:208477/1‑94 (MQ=255) cGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGtt > 4:128441/1‑149 (MQ=255) gCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGa > 5:194439/1‑132 (MQ=255) gCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGa < 6:194439/132‑1 (MQ=255) gCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCg < 8:303899/149‑1 (MQ=255) aTGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCa > 2:224638/1‑149 (MQ=255) gacaaaGCCGCGCGATTGCGCGGCTTTTTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCAcc > 4:294845/4‑149 (MQ=255) aGCCGCGCGATTGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCTGTGc > 3:231888/1‑149 (MQ=255) cgcgCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGCACCGTGGACCAAAGGATTTTGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCTGTGCCAt < 8:121465/149‑1 (MQ=255) cgcgCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCTGTGCCAt < 7:258815/149‑1 (MQ=255) gcgcAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCTGTGCCATc < 6:268262/149‑1 (MQ=255) gcgcAACCGCGCGCCTTTGTCGTATCTGGTGGGCCCACACGGTCTCGAACCGTGGCCCAAAGGATTATGCGTCCTCTGCTCTAACCAACTGACATAAAGGCCCACACTAAGTGGGCGGATTATAACGAGGGTTACGCACCTGTGCCaac > 7:267601/1‑147 (MQ=255) aaTCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCTGTGCCATCTGaa < 1:224638/149‑1 (MQ=255) ttgcgcgGCTTTTTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCTGTGCCATCTGAAAg < 3:294845/147‑1 (MQ=255) gcgGCTTTGTCGTATCTGGTGGGCCCACACGGACTCataatcctttggtccacggttcgagtccgtgt > 2:254994‑M1/1‑36 (MQ=255) gcgGCTTTGTCGTATCTGGTGGGCCCACACGGACTCataatcctttggtccacggttcgagtccgtgt < 1:254994‑M1/68‑33 (MQ=255) tGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCTGTGCCATCTGaaa > 7:224550/1‑137 (MQ=255) tGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCTGTGCCATCTGaaa < 8:224550/137‑1 (MQ=255) gTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCTGTGCCATCTGAAAGATCCGATAGTGCTAt > 2:247404/1‑149 (MQ=255) ccACACGGACTCGAACCGTGGACCAAAGGATTATgagtccgtgtgggcccaccagatacgacaaagccgcgcgattgcgcggctttttcatgcccgcaagaaataaatggtcaggggcgcgtacatccagcgcagcggcgccgagcgca < 5:214452‑M2/149‑116 (MQ=255) ccACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCTGTGCCATCTGAAAGATCCGATAGTGCTATGCGAAGAAAcgcg < 3:128441/149‑1 (MQ=255) acacGGACTCGAACCGTGGACCAAAGGATTATgagtccgtgtgggcccaccagatacgacaaagccgc > 2:254994‑M2/1‑32 (MQ=255) acacGGACTCGAACCGTGGACCAAAGGATTATgagtccgtgtgggcccaccagatacgacaaagccgc < 1:254994‑M2/68‑37 (MQ=255) acGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCTGTGCCATCTGAAAGATCCGATAGTGCTATGCGAAGAAACGAGGCcg > 5:323154/1‑149 (MQ=255) aCTCatactcctttggtccacggttcgcgtccgtgtgggcccaccagatacgaccacgccgcgcgattgcgcggctttttcatgcccgcaagaaataaatggtcaggggcgcgtacatccagcgcagcggcgccgagcgcatgaccttg < 7:121465‑M1/149‑146 (MQ=255) cTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCTGTGCCATCTGa > 2:192725/1‑109 (MQ=255) cTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCTGTGCCATCTGa < 1:192725/109‑1 (MQ=255) tCataatcctttggtccacggttcgagtccgtgtgggcccaccagatacgacaaagccgcgcgattgcgcggctttttcatgcccgcaagaaataaatggtcaggggcgcgtacatccagcgcagcggcgccgagc < 7:51210‑M1/136‑135 (MQ=255) tCataatcctttggtccacggttcgagtccgtgtgggcccaccagatacgacaaagccgcgcgattgcgcggctttttcatgcccgcaagaaataaatggtcaggggcgcgtacatccagcgcagcggcgccgagc > 8:51210‑M1/1‑2 (MQ=255) | GATACCGTTTTAGCGCTACTTCCAAGGTCATGCGCTCGGCGCCGCTGCGCTGGATGTACGCGCCCCTGACCATTTATTTCTTGCGGGCATGAAAAAGCCGCGCAATCGCGCGGCTTTGTCGTATCTGGTGGGCCCACACGGACTCGAACCGTGGACCAAAGGATTATGAGTCCTCTGCTCTAACCAACTGAGCTATAGGCCCTCAGTAAGTGGGCGGATTATAACGAGGGTTTCGCACCTGTGCCATCTGAAAGATCCGATAGTGCTATGCGAAGAAACGCGGCCGCGAA > NC_002947/466995‑467284 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |