New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 468712	63 (1.250)	4 (0.090)	4/238	NT	6.6%	coding (2245/3744 nt)	PP_0386	sensory box protein
	?	NC_002947	= 468784	56 (1.210)					coding (2173/3744 nt)	PP_0386	sensory box protein

GCCTGGGCGTGCTTGATGCTGGAGATGTCTGCAAAAACCGCCACGAAGTGGGTGATCTCGCGGTCGCTGTTGCGCACGGCGCTTATGGTCAGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGGCCCTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/468555‑468712 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccctcggcCAGACCCCGCGCCTGCTCGCCTCTGGCCAGCACGACAGC‑GCTTTCTACCTGGCCATGTGGCACCAGCTTACCGCCGAGGGCCACTGGCAGGGCGAAATCTACAACAAGCGCAAGAACGGCGAACTTTACCCAAGCTGGCTGACCATAA  <  NC_002947/468784‑468637                                                                                                                                                                                                                                                                                                                     GCCTGGGCGTGCTTGATGCTGGAGATGTCTGCAAAAACCGCCACGAAGTGGGTGATCTCGCGGTCGCTGTTGCGCACGGCGCTTATGGTCAGCCAGCTTCGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTG                                                                                                                                                                <  1:310734/149‑1  CCTGGGCGTGCTTGATGCTGGAGATGTCTGCAAAAACCGCCACGAAGTGGGTGATCTCGCGGTCGCTGTTGCGCACGGCGCTTATGGTCAGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGG                                                                                                                                                               <  7:148500/149‑1  CCTGGGCGTGCTTGATGCTGGAGATGTCTGCAAAAACCGCCACGAAGTGGGTGATCTCGCGGTCGCTGTTGCGCACGGCGCTTATGGTCAGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGG                                                                                                                                                               >  3:298128/1‑149   CTGGGCGTGCGTGATGCTGGAGATGTCTGCAAAAACCGCCACGAAGTGGGTGATCTCGCGGTCGCTGTTGCGCACGGCGCTTATGGTCAGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGGC                                                                                                                                                              <  6:238813/149‑1      GGCGTGGTTGATGCTGGATATGTGTGCAAAAACCGCCACGAAGTGGGTGATCTCGCGGTCGCTGTTGCGCACGGCGCTTATGGTCAGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGGCC                                                                                                                                                             <  8:76558/147‑1      GGCGTGCTTGATGCTGGAGATGTCTGCAAAAACCGCCACGAAGTGGGTGATCTCGCGGTCGCTGTTGCGCACGGCGCTTATGGTCAGCCAGCTTGGGTAAAGTTCTCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGGCCCT                                                                                                                                                           <  4:225159/149‑1                                                           CGCGGTCGCTGTTGCGCACGGCGCTTATGGTCAGCCAGCTTGGGTAAAGTTCACCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGGCCCTCGGCCAGACCCCGCGCCTGCTCGCCTCTGGCCAGCACGACAGC‑GCTTTCTACC                                                                                                     >  1:83795/1‑149                                                                                        GTCAGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGGCCCTCGGCCAGACCCCGCGCCTGCTCGCCTCTGGCCAGCACGACAGC‑GCTTTCTACCTGGCCATGTGGCACCAGCTTACCGCCGAG                                                                        >  8:160599/1‑149                                                                                         TCAGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGGCCCTCGGCCAGACCCCGCGCCTGCTCGCCTCTGGCCAGCACGACAGC‑GCTTTCTACCTGGCCATGTGGCACCAGCTTACCGCCGAGG                                                                       <  2:83795/149‑1                                                                                           AGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGGCCCTCGGCCAGACCCCGCGCCTGCTCGCCTCTGGCCAGCACGACAGC‑GCTTTCTACCTGGCCATGTGGCACCAGCTTACCGCCGAGGG                                                                      <  7:160599/148‑1                                                                                                                                                     GGCCCTCGGCCCGACCCCGCGCCTGCTCGCCTCTGGCCAGCACGACAGC‑GCTTTCTACCTGGCCATGTGGCACCAGCTTACCGCCGAGGGCCACTGGCAGGGCGAAATCTACAACAAGCGCAAGAACGGCGAACTTTACCCACGCTGGC           >  4:40609/1‑149                                                                                                                                                     GGCCCTCGGCCAGACCCCGCGCCTGCTCGCCTCTGGCCAGCACGACAGCGGCTTTCTACCTGGCCATGTGGCACCAGCTTACCGCCGAGGGCCACTGGCAGGGCGAAATCTACAACAAGCGCAAGAACGGCGAACTTTACCCAAGCTGG            >  1:237509/1‑149                                                                                                                                                     GGCCCTCGGCCAGACCCCGCGCCTGCTCGCCTCTGGCCAGCACGACAGC‑GCTTTCTACCTGGCCATGTGGCACCAGCTTACCGCCGAGGGCCACTGGCAGGGCGAAATCTACAACAAGCGCAAGAACGGCGAACTTTACCCAAGCTGGC           >  6:259324/1‑149                                                                                                                                                      GCCCTCGGCCAGACCCCGCGCCTGCTCGCCTCTGGCCAGCACGACAGC‑GCTTTCTACCTGGCCATGTGGCACCAGCTTACCGCCGAGGGCCACTGGCAGGGCGAAATCTACAACAAGCGCAAGGACGGCGAACTTTACCCAAGCTGGCT          <  2:162095/149‑1                                                                                                                                                        CCTCGGCCAGACCCCGCGCCTGCTCGCCTCTGGCCAGCACGACAGC‑GCTTTCTACCTGGCCATGTGGCACCAGCTTACCGCCGAGGGCCACTGGCAGGGCGAAATCTACAACAAGCGCAAGAACGGCGAACTTTACCCAAGCTGGCTGA        <  5:259324/149‑1                                                                                                                                                        CCTCGGCCAGACCCCGCGCCTGATCGCCTATGGCCAGCACGACAGA‑GCTTTCTACCTGGCCATGTGGCACCAGCTTACCGCCGAGGGCCACTGGCAGGGCGAAATCTACAACAAGCGCAAGAACGGCGAACTTTACCCAAGCTGGCTGA        >  7:47684/1‑149                                                                                                                                                         CTCGGCCAGACCCCGCGCCTGCTAGCCTCTGGCCAGCACGACAGC‑GCTTTCTAACTGGCCATGTGGCACCAGCTTACCGCCGAGGGCCACTGGCAGGGCGAAATCTAGAACAAGCGCAAGAACCGCGAACTGTCACCAAGCTGGCTGAC       >  8:247149/1‑149                                                                                                                                                          TCGGCCAGACCCCGCGCCTGCTCGCCTCTGGCCAGCACGACAGC‑GCTTTCTACCTGGCCATGTGGCACCAGCTTACCGCCGAGGGCCACTGGCAGGGCGAAATCTACAACAAGCGCAAGAACGGCGAACTTTACCCAAGCTGGCTGAC       >  8:160198/1‑148                                                                                                                                                              CCAGACCCCGCGCCTGCTCGCCTCTGGCCAGCACGACAGC‑GCTTTCTACCTGGCCATGTGGCACCAGCTTACCGCCGAGGGCCACTGGCAGGTCGAAATCTACAACAAGCGCAAGAACGGCGAACTTTACCCAAGCTGGCTGACCATAA  <  7:160198/149‑1                                                                                                                                                                                                                                                                                                                     GCCTGGGCGTGCTTGATGCTGGAGATGTCTGCAAAAACCGCCACGAAGTGGGTGATCTCGCGGTCGCTGTTGCGCACGGCGCTTATGGTCAGCCAGCTTGGGTAAAGTTCGCCGTTCTTGCGCTTGTTGTAGATTTCGCCCTGCCAGTGGCCCTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/468555‑468712 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccctcggcCAGACCCCGCGCCTGCTCGCCTCTGGCCAGCACGACAGC‑GCTTTCTACCTGGCCATGTGGCACCAGCTTACCGCCGAGGGCCACTGGCAGGGCGAAATCTACAACAAGCGCAAGAACGGCGAACTTTACCCAAGCTGGCTGACCATAA  <  NC_002947/468784‑468637

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.