| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 775904 = | 52 (1.030) | 4 (0.080) | 4/248 | NT | 7.8% | coding (10/966 nt) | PP_0668 | transmembrane sensor |
| ? | NC_002947 | 775968 = | 44 (0.910) | coding (74/966 nt) | PP_0668 | transmembrane sensor | |||||
ATGTTCTCTACGTACGACCAGGCCAGGCGATGCCGCGTATCCTCGTTCAGCCAGGCATGCCACTGCGCCTGGATCGCAGCGTCATTGTGCGCCGCGTGCAGCCGTGCGAACCAACCGGCAGCCGCTTGCAGTACGGCATGGTCGAGTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/776055‑775904‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGATACGCGGCATCGCCTGGCCTGGTCGTACGTAGAGAACATCAATCAGCGCTTTGGCGGCCTCAGCGGCCAGGCAGAGCAGGCTCGGCAAGTGTTCGACAG > NC_002947/775968‑776115 ATGTTCTCTACGTACGACCAGGCCAGGCGATGCCGCGTATCCTCGTTCAGCCAGGCATGCCACTGCGCCTGGATCGCAGCGTCATTGTGCGCCGCGTGCAGCCGTGCGAACCAACCGGCAGCCGCTTGCAGTACGGCATGGTCGAGTGG < 2:191472/149‑1ATGTTCTCTACGTACGACCAGGCCAGGCGATGCCGCGTATCCTCGTTCAGCCAGGCATGCCACTGCGCCTGGATCGCAGCGTCATTGTGCGCCGCGTGCAGCCGTGCGAACCAACCGGCAGCCGCTTGCAGTACGGCATGGTCGAGTG < 6:290112/148‑1 TTCTCTACGTACGACCAGGCCAGGCGATGCCGCGTATCCTCGTTCAGCCAGGCATGCCACTGCGCCTGGATCGCAGCGTCATTGTGCGCCGCGTGCAGCCGTGCGAACCAACCGGCAGCCGCTTGCAGTACGGCATGGTCGAGTGGCGC > 6:196363/1‑149 TTCTCTACGTACGACCAGGCCAGGCGATGCCGCGTATCCTCGTTCAGCCAGGCATGCCACTGCGCCTGGATCGCAGCGTCATTGTGCGCCGCGTGCAGCCGTGCGAACCAACCGGCAGCCGCTTGCAGTACGGCATGGTCGAGTGGCG < 8:180470/148‑1 CATTGTGCGCCGCGTGCAGCCGTGCGAACCAACCGGCAGCCGCTTGCAGTACGGCATGGTCGAGTGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGATACGCGGCATCGCCTGGCCTGGTCGTACG > 8:84985/1‑148 TTGTGCGCCGCGTGCAGCCGTGCGAACCAACCGGCAGCCGCTTGCAGTACGGCATGGTCGAGTGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGATACGCGGCATCGCCTGGCCTGGTCGTACGTAG < 1:68696/149‑1 TTGTGCGCCGCGTGCAGCCGTGCGAACCAACCGGCAGCCGCTTGCAGTACGGCATGGTCGAGTGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGATACGCGGCATCGCCTGGCCTGGTCGTACG > 2:68696/1‑146 CGCGTGCAGCCGTGCGAACCAACCGGCAGCCGCTTGCAGTACGGCATGGTCGAGTGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGATACGCGGCATCGCCTGGCCTGGTCGTACGTAGAGAACATC < 7:84985/149‑1 GCGCGCAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGATACGCGGCATCGCCTGGCCTGGTCGTACGTAGAGAACATCAATCAGCGCTTTGGCGGCCTCAGCGGCCAGGCAGAGCAGGCTCGGCAAGTGTTCGA > 3:284707/1‑149 CACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGATACGCGGCATCGCCTGGCCTGGTCCTACGTAGAGAACATCAATCAGCGCTTTGGCGGCCTCAGCGGCCAGGCAGAGCAGGCTCGGCAAGTGTTCGAAAG > 7:247701/1‑149 ATGTTCTCTACGTACGACCAGGCCAGGCGATGCCGCGTATCCTCGTTCAGCCAGGCATGCCACTGCGCCTGGATCGCAGCGTCATTGTGCGCCGCGTGCAGCCGTGCGAACCAACCGGCAGCCGCTTGCAGTACGGCATGGTCGAGTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/776055‑775904‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGATACGCGGCATCGCCTGGCCTGGTCGTACGTAGAGAACATCAATCAGCGCTTTGGCGGCCTCAGCGGCCAGGCAGAGCAGGCTCGGCAAGTGTTCGACAG > NC_002947/775968‑776115 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |