New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	775904 =	52 (1.030)	4 (0.080)	4/248	NT	7.8%	coding (10/966 nt)	PP_0668	transmembrane sensor
	?	NC_002947	775968 =	44 (0.910)					coding (74/966 nt)	PP_0668	transmembrane sensor

CCATGGCGCAGTTGCAGGGCATGAAGCAACGCGAGATCGCCGAGCAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGATACGCGGCATCGCCTGGCCTGGTCGTACGTAGAGAA  >  NC_002947/775756‑776052                                                                                                                                                     |                                                                                                                                                     ctttcgaacacttgccgagcctgctctgcctggccgctgaggccgccaaagcgctgattgatgttctctacgtaggaccaggccaggcgatgccgcgtatcctcgttcagccaggcatgccactgcgcctggatcgcagcgtcattgtg                                                                                                                                                      >  7:247701‑M1/149‑149 (MQ=255)    tcgaacacttgccgagcctgctctgcctggccgctgaggccgccaaagcgctgattgatgttctctacgtacgaccaggccaggcgatgccgcgtatcctcgttcagccaggcatgccactgcgcctggatcgcagcgtcattgcgcgc                                                                                                                                                   >  3:284707‑M1/146‑149 (MQ=255)       cgcAGTTGCAGGGCATGAAGCAACGCGAGATCGCCGAGCAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCAc                                                                                                                                                >  5:220145/1‑149 (MQ=255)       cgcAGTTGCAGGGCATGAAGCAACGCGAGATCGCCGAGCAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCAc                                                                                                                                                >  2:247490/1‑149 (MQ=255)        gcAGTTGCAGGGCATGAAGCAACGCGAGATCGCCGAGCAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACt                                                                                                                                               >  1:41127/1‑149 (MQ=255)                aGGGCATGAAGCAACGCGAGATCGCCGAGCAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCa                                                                                                                                                 >  4:210585/1‑139 (MQ=255)                aGGGCATGAAGCAACGCGAGATCGCCGAGCAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCa                                                                                                                                                 <  3:210585/139‑1 (MQ=255)                 gggCATGAAGCAACGCGAGATCGCCGAGCAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGc                                                                                                                                      >  5:200340/1‑149 (MQ=255)                  ggCATGAAGCAACGCGAGATCGCCGAGCAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGgcgc                                                                                                                                                   >  1:153253/1‑135 (MQ=255)                  ggCATGAAGCAACGCGAGATCGCCGAGCAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGgcgc                                                                                                                                                   <  2:153253/135‑1 (MQ=255)                   gCATGAAGCAACGCGAGATCGCCGAGCAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCg                                                                                                                                    <  2:186309/149‑1 (MQ=255)                     aTGAAGCAACGCGAGATCGCCGAGCAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTa                                                                                                                                  <  7:25901/149‑1 (MQ=255)                        aaGCAACGCGAGATCGCCGAGCAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGgcgc                                                                                                                                                   <  5:51006/129‑1 (MQ=255)                        aaGCAACGCGAGATCGCCGAGCAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGgcgc                                                                                                                                                   >  6:51006/1‑129 (MQ=255)                        aaGCAACGCGAGATCGCCGAGCAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACt                                                                                                                                <  2:61715/148‑1 (MQ=255)                                       gCCGAGCAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCggt                                                                                                                <  6:220145/149‑1 (MQ=255)                                        ccGAGCAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCggtt                                                                                                               >  5:132369/1‑149 (MQ=255)                                        ccGAGCAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCggtt                                                                                                               >  1:4120/1‑149 (MQ=255)                                         cGAGCAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCggttg                                                                                                              <  3:248378/149‑1 (MQ=255)                                            gCAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCggttggtt                                                                                                           <  6:200340/149‑1 (MQ=255)                                             cAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTc                                                                                                          <  8:87279/149‑1 (MQ=255)                                                  gggCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCAc                                                                                                      <  2:4120/148‑1 (MQ=255)                                                     cGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCt                                                                                                  <  1:247490/149‑1 (MQ=255)                                                            gatgttctctacgtacgaccaggccaggcgatgccgcgtatcctcgttcagccaggcatgccactgcgcctggatcgcagcgtcattgtGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCAcgcg                                                                                           <  7:84985‑M1/60‑1 (MQ=255)                                                             agcgCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCggttg                                                                                                              >  1:14166/1‑129 (MQ=255)                                                             agcgCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCggttg                                                                                                              <  2:14166/129‑1 (MQ=255)                                                                    ctacgtacgaccaggccaggcgatgccgcgtatcctcgttcagccaggcatgccactgcgcctggatcgcagcgtcattgtGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACaa                                                                                   <  1:68696‑M1/68‑1 (MQ=255)                                                                       cgtacgaccaggccaggcgatgccgcgtatcctcgttcagccaggcatgccactgcgcctggatcgcagcgtcattgtGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACaa                                                                                   >  2:68696‑M1/79‑146 (MQ=255)                                                                       cgtacgaccaggccaggcgatgccgcgtatcctcgttcagccaggcatgccactgcgcctggatcgcagcgtcattgtGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATg                                                                                 >  8:84985‑M1/79‑148 (MQ=255)                                                                        aaCAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGa                                                                                <  6:132369/148‑1 (MQ=255)                                                                               aCCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCggt                                                                                                                <  6:277073/109‑1 (MQ=255)                                                                               aCCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCggt                                                                                                                >  5:277073/1‑109 (MQ=255)                                                                                 cTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCggttggt                                                                                                            >  1:235296/1‑111 (MQ=255)                                                                                 cTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCggttggt                                                                                                            <  2:235296/111‑1 (MQ=255)                                                                                 cTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATc                                                                      >  3:251327/1‑149 (MQ=255)                                                                                     cTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCggtt                                                                                                               <  1:136468/104‑1 (MQ=255)                                                                                     cTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCggtt                                                                                                               >  2:136468/1‑104 (MQ=255)                                                                                     cTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAgg                                                                  <  2:41127/149‑1 (MQ=255)                                                                                      tCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGgc                                                                 >  4:257974/1‑149 (MQ=255)                                                                                      tCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGgc                                                                 >  5:13687/1‑149 (MQ=255)                                                                                        aGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGgc                                                                 <  3:257974/147‑1 (MQ=255)                                                                                         ggCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCg                                                                                                                                    <  3:4349/79‑1 (MQ=255)                                                                                         ggCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCg                                                                                                                                    >  4:4349/1‑79 (MQ=255)                                                                                         caaggcatACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGGCGCa                                                              <  5:162008/142‑1 (MQ=255)                                                                                          gCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGGCGCAg                                                             >  2:108930/1‑149 (MQ=255)                                                                                            tATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGGCGCAGTg                                                           >  3:315760/1‑149 (MQ=255)                                                                                                   cAATGCCTGCTGCTGGAAGCCGAACTTGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGcc                                                    <  8:203849/149‑1 (MQ=255)                                                                                                   cAATGCCTGCTGCTGGAAGCCGAACTGGATCGCGCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGcc                                                    <  2:248113/149‑1 (MQ=255)                                                                                                             tgctgGAAGCCGAACTCGATGGCTCGCTGGCATGAGAAGGGCGCAACTCGACCATGCAGTACTGCAAGCGGCTGCAGGTTGGTTCGCACGGCTGCAATCGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAAc                                           >  1:144849/1‑148 (MQ=255)                                                                                                                 ggAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGa                                      >  8:269645/1‑149 (MQ=255)                                                                                                                  gAAGCCGATCTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAgg                                       <  7:215543/147‑1 (MQ=255)                                                                                                                  gAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGAt                                     <  6:13687/149‑1 (MQ=255)                                                                                                                               aTGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGATACGCGGCATCgcc                        <  4:251327/149‑1 (MQ=255)                                                                                                                                  gCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGATACGCGGCATCgcctg                      <  1:108930/148‑1 (MQ=255)                                                                                                                                  gCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGATACGCGGCATCgcctg                      <  4:315760/148‑1 (MQ=255)                                                                                                                                   cTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGTATGCCTGGCTGAACGAGGATACGCGGCATCgcctggc                    <  7:104326/149‑1 (MQ=255)                                                                                                                                    tCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGATACGCGGCATCgcctggcc                   >  5:196363/1‑149 (MQ=255)                                                                                                                                    tCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGCCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGATACGCGGCATCgcctggcc                   >  1:101527/1‑149 (MQ=255)                                                                                                                                    tCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGACTGCACGCGGCGCACAATGACGCTg                                                                           <  4:34560/93‑1 (MQ=255)                                                                                                                                    tCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGACTGCACGCGGCGCACAATGACGCTg                                                                           >  3:34560/1‑93 (MQ=255)                                                                                                                                          gCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGACTGGCTGAACGAGGATACGCGGCATCGCCTGGCCTGGTcg             >  7:14457/1‑149 (MQ=255)                                                                                                                                            aTGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGATACGCGGCATCGCCTGGCCTGGTcgta           >  3:43178/1‑149 (MQ=255)                                                                                                                                                  aGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGATCCGCGGCATCGCCTGGCCTGGTcgtacgta       >  7:56742/1‑147 (MQ=255)                                                                                                                                                   gggCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGATACGCGGCATCGCCTGGCCTGGTCGTACGTagag    <  3:260744/149‑1 (MQ=255)                                                                                                                                                     GCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGATACGCGGCATCGCCTGGCCTGGTCGTACGTAGAGaa  >  6:196363‑M1/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CCATGGCGCAGTTGCAGGGCATGAAGCAACGCGAGATCGCCGAGCAGTTGGGCGTGAGCGAGCGCAGTGTGAACAGTTACCTGGCTCAGGCTATGTACCAATGCCTGCTGCTGGAAGCCGAACTGGATGGCTCGCTGGCATGAGCAGGGCGCCACTCGACCATGCCGTACTGCAAGCGGCTGCCGGTTGGTTCGCACGGCTGCACGCGGCGCACAATGACGCTGCGATCCAGGCGCAGTGGCATGCCTGGCTGAACGAGGATACGCGGCATCGCCTGGCCTGGTCGTACGTAGAGAA  >  NC_002947/775756‑776052

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.