New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 822159	35 (0.690)	4 (0.080)	4/248	NT	9.6%	coding (1530/2412 nt)	PP_0707	hypothetical protein
	?	NC_002947	= 822215	42 (0.870)					coding (1586/2412 nt)	PP_0707	hypothetical protein

GAAACCCTGCTGTCGCCCCGACAGCCCGGTGGCCTGGCACTGGCGTCGACCCTGGGCCTGGCGCCTCGCCATCAGGCGCAGGCCAGCACCATACTGGCCGGCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGATGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/822007‑822159 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgCCGGTCCCATCCCAGTCGCCCAGACTCAACAGCAATTCGCTAGGGCTGGTACCCGACGGCATCAACACCAGCAGCAGTGCCAGGAACAGCACGACAGTGCGGCCGATGCCGGCCAGTATGGTGCTGGCCTGCGCCTGATGGCGAGG  <  NC_002947/822215‑822070                                                                                                                                                                                                                                                                                                             GAAACCCTGCTGTCGCCCCGACAGCCCGGTGGCCTGGCACTGGCGTCGACCCTGGGCCTGGCGCCTCGCCATCAGGCGCAGGCCAGCACCATACTGTCCGTCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGAT                                                                                                                                                        <  3:13036/149‑1     CCCTGCTGTCGCCCCGACAGCCCGGTGGCCTGGCACTGGCGTCGACCCTGGGCCTGGCGCCTCGCCATCAGGCGCAGGCCAGCACCATACTGGCCGGCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGATGCCG                                                                                                                                                    >  1:24220/1‑149       CTGCTGTCGCCCCGACAGCCCGGTGGCCTGGCACTGGCGTCGACCCTGGGCCTGGCGCCTCGCCATCAGGCGCAGGCCAGCACCATACTGGCCGGCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGAT                                                                                                                                                        >  7:279587/1‑143       CTGCTGTCGCCCCGACAGCCCGGTGGCCTGGCACTGGCGTCGACCCTGGGCCTGGCGCCTCGCCATCAGGCGCAGGCCAGCACCATACTGGCCGGCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGAT                                                                                                                                                        <  8:279587/143‑1                                  CTGGCACTGGCGTCGACCCTGGGCCTGGCGCCTCGCCATCAGGCGCAGGCCAGCACCATACTGGCCGGCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGATGCTGGTGTTGATGCCGCCGGTCCCATCCCAGTCGCCCAGACTCAA                                                                                                                       >  8:96105/1‑149                                        CTGGCGTCGACCCTGGGCCTGGCGCCTCGCCATCAGGCGCAGGCCAGCACCATACTGGCCGGCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGAT                                                                                                                                                        >  7:131412/1‑110                                        CTGGCGTCGACCCTGGGCCTGGCGCCTCGCCATCAGGCGCAGGCCAGCACCATACTGGCCGGCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGAT                                                                                                                                                        <  8:131412/110‑1                                                             GCGCCTCGCCATCAGGCGCAGGCCAGCACCATACTGGCCGGCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGATGCCGCCGGTCCCATCCCAGTCGCCCAGACTCAACAGCAATTCGCTAGGGCTGGTACCCGA                                                                                            <  7:96105/149‑1                                                                        TCAGGCGCAGGCCAGCACCATACTGGCCGGCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGATGCCGCCGGTCCCATCCCAGTCGCCCAGACTCAACAGCAATTCGCTAGGGCTGGTACCCGACG                                                                                          <  3:69642/140‑1                                                                        TCAGGCGCAGGCCAGCACCATACTGGCCGGCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGATGCCGCCGGTCCCATCCCAGTCGCCCAGACTCAACAGCAATTCGCTAGGGCTGGTAACCGACG                                                                                          >  4:69642/1‑140                                                                                                                                                       CCGCCGGTCCCATCCCAGTCGCCCAGACTCAACAGCAATTCGCTAGGGCTGGTACCCGACGGCATCAACACCAGCAGCAGTGCCAGGAACAGCACGACAGTGCGGCCGATGCCGGCCAGTATGGTGCTGGCCTGCGCCTGATGGCGAGG  >  2:24220/1‑149                                                                                                                                                                                                                                                                                                             GAAACCCTGCTGTCGCCCCGACAGCCCGGTGGCCTGGCACTGGCGTCGACCCTGGGCCTGGCGCCTCGCCATCAGGCGCAGGCCAGCACCATACTGGCCGGCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGATGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/822007‑822159 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgCCGGTCCCATCCCAGTCGCCCAGACTCAACAGCAATTCGCTAGGGCTGGTACCCGACGGCATCAACACCAGCAGCAGTGCCAGGAACAGCACGACAGTGCGGCCGATGCCGGCCAGTATGGTGCTGGCCTGCGCCTGATGGCGAGG  <  NC_002947/822215‑822070

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.