New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 822159	35 (0.690)	4 (0.080)	4/248	NT	9.6%	coding (1530/2412 nt)	PP_0707	hypothetical protein
	?	NC_002947	= 822215	42 (0.870)					coding (1586/2412 nt)	PP_0707	hypothetical protein

CCTCGCCATCAGGCGCAGGCCAGCACCATACTGGCCGGCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGATGCCGTCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCAAGCGCTGGCTGAGCGACCGCCTGCTGCCGGAAACCGAGATGGACGCCGGCA  >  NC_002947/822070‑822361                                                                                                                                                  |                                                                                                                                                    ccTCGCCATCAGGCGCAGGCCAGCACCATACTGGCCGGCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGATGCCGTCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGcgg                                                                                                                                                  >  2:24220‑M2/1‑146 (MQ=255)      ccATCAGGCGCAGGCCAGCACCATACTGGCCGGCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGATGCCGTCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAgg                                                                                                                                             <  1:245616/149‑1 (MQ=255)               gcAGGCCAGCACCATACTGGCCGGCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGATGCCGTCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGc                                                                                                                                     >  3:56204/1‑148 (MQ=255)                 aGGCCAGCACCATACTGGCCGGCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGATGCCGTCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAAc                                                                                                                                  <  4:56204/149‑1 (MQ=255)                 aGGCCAGCACCATACTGGCCGGCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGATGCCGTCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAAc                                                                                                                                  >  3:266057/1‑149 (MQ=255)                             tACTGGCCGGCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGATGCCGTCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑g                                                                                                                     <  7:66663/149‑1 (MQ=255)                                    cGGCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGATGCCGTCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAg                                                                                                               >  5:59357/1‑148 (MQ=255)                                             ccGCACTGTCGTGCTGTTCCTTGCACTGCTGCTGGTGTTGATGCCGTCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGAAGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCctgc                                                                                                     >  3:35348/1‑149 (MQ=255)                                               gCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGATGCCGTCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCctgctg                                                                                                   <  4:266057/149‑1 (MQ=255)                                                     tCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGATGCCGTCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTg                                                                                             >  8:175765/1‑149 (MQ=255)                                                                   gCACTGCTGCTGGTGTTGATGCCGTCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCgg                                                                               >  7:100710/1‑149 (MQ=255)                                                                    cACTGCTGCTGGTGTTGATGCCGTCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGt                                                                              <  8:83248/149‑1 (MQ=255)                                                                        gctgctgGTGTTGATGCCGTCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGcc                                                                          >  1:795/1‑149 (MQ=255)                                                                          tgctgGTGTTGATGCCGTCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTg                                                                        >  3:24133/1‑149 (MQ=255)                                                                             tgGTGTTGTTGCCGTCGGGTACCAGGGCTTGCGAATTGCTGTTGAGTCTGGGGGACTGGGATGGGACCGGCGGGAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTTGCCTTGGCGATCTTCCTCGGTGGCCTGTTc                                                                     <  4:35348/149‑1 (MQ=255)                                                                             tgGTGTTGTTGCCGTCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTc                                                                     <  8:100710/149‑1 (MQ=255)                                                                                  ttGATGCCGTCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCAt                                                                <  8:58579/149‑1 (MQ=255)                                                                                         cGTCGGTTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGcggcatcaacaccagcagcagtgccaggaacagcacgacagtgcggccgatgccggccagtatggtgctggcctgcgcctga                                                                   >  4:69642‑M2/1‑58 (MQ=255)                                                                                         cGTCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGcggcatcaacaccagcagcagtgccaggaacagcacgacagtgcggccgatgccggccagtatggtgctggcctgcgcctga                                                                   <  3:69642‑M2/140‑83 (MQ=255)                                                                                           tCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGcggcatcaacaccagcagcagtgccaggaacagcacgacagtgcggccgatgccggccagtatggtgctggcctgcgcctgatggcgaggcgc                                                        <  7:96105‑M2/149‑94 (MQ=255)                                                                                           tCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGt                                                       >  6:113421/1‑149 (MQ=255)                                                                                           tCGGGTACCAGCCCTAGCGAATTGCTGTTGAGGCGGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGt                                                       <  7:81103/149‑1 (MQ=255)                                                                                              ggTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCaa                                                    <  7:175765/149‑1 (MQ=255)                                                                                                  ccAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCAAgcg                                                 <  5:113421/148‑1 (MQ=255)                                                                                                   cAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCgtgt                                                          >  8:178718/1‑138 (MQ=255)                                                                                                   cAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCgtgt                                                          <  7:178718/138‑1 (MQ=255)                                                                                                         tAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCAAGCgctggct                                           >  6:246231/1‑147 (MQ=255)                                                                                                           gCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCAAGCGCTGGCTGAg                                        <  2:795/148‑1 (MQ=255)                                                                                                              aaTTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCAAGCGCTGGCTGAGCGAc                                    >  5:7207/1‑149 (MQ=255)                                                                                                               aTTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCAAGCGCTGGCTGAGCGAcc                                   <  6:59357/149‑1 (MQ=255)                                                                                                               aTTGCTGGTGAGTCTGGGCGACTTGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTTGGCAAGCACTGGCTGAGCGAcc                                   <  4:262550/149‑1 (MQ=255)                                                                                                                   cTGTTGAGTCTGGGCGACTGGGTTGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGAAATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCAAGCGGTGGCTGAGCGACCGCct                               >  7:202671/1‑149 (MQ=255)                                                                                                                    tGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCAAGCGCTGGCTGAGCGACCGCctg                              >  8:103966/1‑149 (MQ=255)                                                                                                                    tGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCAAGCGCTGGCTGAGCGACCGCctg                              >  7:219217/1‑149 (MQ=255)                                                                                                                      ttGAGTCTGGGCGACTGGGATGGGACCGGcggcatcaacaccagcatcagtgccaggaacagcacgacagtgcggccgatgccggccagtatggtgctggcctgcgcctgatggcgaggcgccaggcccagggtcgacgccagtgccag                             >  8:96105‑M2/1‑29 (MQ=255)                                                                                                                      ttGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCAAGCgct                                               >  6:211943/1‑130 (MQ=255)                                                                                                                      ttGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCAAGCgct                                               <  5:211943/130‑1 (MQ=255)                                                                                                                         aGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCAAGCGCTGGCTGAGCGACCGCCtgctgc                          <  8:219217/148‑1 (MQ=255)                                                                                                                           tCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCAAGCGCTGGCTGAGCGACCGCCTGCTGCCg                        >  5:48008/1‑148 (MQ=255)                                                                                                                             tGGGCGACTGGGATGGGGCCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCg                                                                                <  8:190123/90‑1 (MQ=255)                                                                                                                             tGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTc                                                                                    >  6:22875/1‑86 (MQ=255)                                                                                                                             tGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTc                                                                                    <  5:22875/86‑1 (MQ=255)                                                                                                                             tGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTc                                                                     <  7:205032/101‑1 (MQ=255)                                                                                                                             tGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTc                                                                     >  8:205032/1‑101 (MQ=255)                                                                                                                                     tgggatgggaCCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCAAGCGCTGGCTGAGCGACCGCCTGCTGCCGGAAACCGAGAt             >  3:284004/1‑149 (MQ=255)                                                                                                                                      gggatgggaCCGGCGGCAAGGTGCTCGGCAACCTGAACATCGTGGCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCAAGCGCTGGCTGAGCGACCGCCTGCTGCCGGAAACCGAGAt             >  1:66530/1‑149 (MQ=255)                                                                                                                                       ggatgggaCCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCAAGCGCTGGCTGa                                         >  6:171630/1‑119 (MQ=255)                                                                                                                                       ggatgggaCCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCAAGCGCTGGCTGa                                         <  5:171630/119‑1 (MQ=255)                                                                                                                                               ccGGCGGAAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCAAGCGCTGGCTGAGCGACCGCCTGCTGCCGGAAACCGAGATGGACGCCgg    >  5:144177/1‑148 (MQ=255)                                                                                                                                                cggcggCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGTGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCAAGCGCTGGCTGAGCGACCGCCTGCTGCCGGAAACCGAGATGGACGCCGGCa  >  2:67062/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                    CCTCGCCATCAGGCGCAGGCCAGCACCATACTGGCCGGCATCGGCCGCACTGTCGTGCTGTTCCTGGCACTGCTGCTGGTGTTGATGCCGTCGGGTACCAGCCCTAGCGAATTGCTGTTGAGTCTGGGCGACTGGGATGGGACCGGCGGCAAGGTGCTCGGCAACCTGAACATCGT‑GCCGCAGGACATCCTGCTGGCCTTGGCGATCTTCCTCGGTGGCCTGTTCGCCATCCGTGTGGTCAAGCGCTGGCTGAGCGACCGCCTGCTGCCGGAAACCGAGATGGACGCCGGCA  >  NC_002947/822070‑822361

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.