| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 877664 = | 48 (0.950) | 5 (0.100) | 3/246 | NT | 10.1% | coding (515/966 nt) | hprA | glycerate dehydrogenase |
| ? | NC_002947 | 877716 = | 43 (0.900) | coding (463/966 nt) | hprA | glycerate dehydrogenase | |||||
TCGGCCTGCTCGGCCACGGCGAACTGGGCGGCGCAGTGGCGAGGCTGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/877715‑877664‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgaGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAGTCGCACAGCCGAGTGGCCAGGGCCAACAGCAGGGCCAGGGTATGCTGGGCTACA > NC_002947/877716‑877861 TCGGCCTGCTCGGCCACGGCGAACTGGGCGGCGCAGTGGCGAGGCTGGCCGAGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCCCTGGCCCTCGGCCACCGCCTGGGGGTAGgc > 8:272956/1‑144TCGGCCTGCTCGGCCACGGCGAACTGGGCGGCGCAGTGGCGAGGCTGGCCGAGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCCCCGCCGGGTTGTCGTggag > 8:277211/1‑145TCGGCCTGCTCGGCCACGGCGAACTGGGCGGCGCAGTGGCGAGGCTGGCCGAGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAGTC < 7:277211/146‑1TCGGCCTGCTCGGCCACGGCGAACTGGGCGGCGCAGTGGCGAGGCTGGCCGAGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGGCCAGCCGGCAGAACTGGCTGGCCTGGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAGTC < 7:272956/146‑1 CCTGCTCGGCCACGGCGAACTGGGCGGCGCAGTGGCGAGGCTGGCCGAGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAGTCGCACAGC > 7:209411/1‑149 GAGGGTTTTGCCCTCCAGCTCGACTATAGGAAAGTCAAGCAGGAAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAGTCGCACAGCCTAGTGGACAGGGCAAACAGAAGGGACAGGGTATGCTGGGATACA > 4:90019/1‑148 GAGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAGTCGCA > 3:13106/1‑99 GAGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAGTCGCA < 4:13106/99‑1 TCGGCCTGCTCGGCCACGGCGAACTGGGCGGCGCAGTGGCGAGGCTGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/877715‑877664‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgaGGGTTTTGCCCTCCAGCTCGACGATAGGAAAGTCCAGCAGGCAGAACTGGCTGGCCTTGGCCCACTGGCCATCGGCCACCGCCTGGTTGTAGTCGCACAGCCGAGTGGCCAGGGCCAACAGCAGGGCCAGGGTATGCTGGGCTACA > NC_002947/877716‑877861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |