| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 923508 = | 39 (0.770) | 3 (0.060) | 3/246 | NT | 7.3% | coding (1685/2169 nt) | PP_0804 | protein secretion ABC transporter permease/ATP‑binding protein |
| ? | NC_002947 | 923559 = | 39 (0.810) | coding (1634/2169 nt) | PP_0804 | protein secretion ABC transporter permease/ATP‑binding protein | |||||
GCCGGCTGGATATCCAGCCGGGCGAGCGCATTGCCGTGCTGGGCCGCAACGGCGCCGGCAAATCAACCTTGCTGCAGGCGCTGGGTGGGGCCATGGATCTGGTGCAGGGCGAGATCAGCCTGGACGGCATCGCCATGGCCCACCTCGACCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/923661‑923508‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgcACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATC > NC_002947/923559‑923653 GCCGGCTGGATATCCAGCCGGGCGAGCGCATTGCCGTGCTGGGCCGCAACGGCGCCGGCAAATCAACCTTGCTGCAGGCGCTGGGTGGGGCCATGGATCTGGTGCAGGGCGAGATCAGCCTGGACGGCATCGCCATGGCCCACCTCGAC < 3:228241/149‑1 CCGGCTGGATATCCAGCCGGGCGAGCGCATTGCCGTGCTGGGCCGCAACGGCGCCGGCAAATCAACCTTGCTGCAGGCGCTGGGTGGGGCCATGGATCTGGTGCAGGGCGAGATCAGCCTGGACGGCATCGCCATGGCCCACCTCGACC > 5:188127/1‑149 GATATCCAGCCGGGCGAGCGCATTGCCGTGCTGGGCCGCAACGGCGCCGGCAAATCAACCTTGCTGCAGGCGCTGGGTGGGGCCATGGATCTGGTGCAGGGCGAGATCAGCCTGGACGGCATCGCCATGGCCCACCTCGACCCTGC > 7:29032/1‑146 GATATCCAGCCGGGCGAGCGCATTGCCGTGCTGGGCCGCAACGGCGCCGGCAAATCAACCTTGCTGCAGGCGCTGGGTGGGGCCATGGATCTGGTGCAGGGCGAGATCAGCCTGGACGGCATCGCCATGGCCCACCTCGACCCTGC < 8:29032/146‑1 CTGGTGCAGGGCGAGATCAGCCTGGACGGCATCGCCATGGCCCACCTCGACCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCC < 3:83946/118‑1 CTGGTGCAGGGCGAGATCAGCCTGGACGGCATCGCCATGGCCCACCTCGACCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCC > 4:83946/1‑118 TGCAGGGCGAGATCAGCCTGGACGGCATCGCCATGGCCCACCTCGACCCTGCACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATC > 7:268647/1‑147 GCCGGCTGGATATCCAGCCGGGCGAGCGCATTGCCGTGCTGGGCCGCAACGGCGCCGGCAAATCAACCTTGCTGCAGGCGCTGGGTGGGGCCATGGATCTGGTGCAGGGCGAGATCAGCCTGGACGGCATCGCCATGGCCCACCTCGACCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/923661‑923508‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgcACCAGATCCATGGCCCCACCCAGCGCCTGCAGCAAGGTTGATTTGCCGGCGCCGTTGCGGCCCAGCACGGCAATGCGCTCGCCCGGCTGGATATC > NC_002947/923559‑923653 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |