| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1206555 = | 55 (1.090) | 3 (0.060) | 3/246 | NT | 5.9% | coding (2446/3150 nt) | PP_1058 | hypothetical protein |
| ? | NC_002947 | 1206594 = | 43 (0.900) | coding (2407/3150 nt) | PP_1058 | hypothetical protein | |||||
CAAGGTCCACCCGCTGGACCTGTGGCTGCTTGGCTACCTGCTGAAGAACCCGAGCTCGACACTGACCGAGATGATCAACGCCAGTCGTTTCGAACGCCAGGAGGTATACGGCTGGCTGTTCAAGAGCCGCCACCAGGGCGCCCGTGACAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1206706‑1206555‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagccAGCCGTATACCTCCTGGCGTTCGAAACGACTGGCGTTGATCATCTCGGTCAGTGTCGAGCTCGGGTTCTTCAGCAGGTAGCCAAGCAGCCACAGGTCCAGCGGGTGGA > NC_002947/1206594‑1206701 CAAGGTCCACCCGCTGGACCTGTGGCTGCTTGGCTACCTGCTGAAGAACCCGAGCTCGACACTGACCGAGATGATCAACGCCAGTCGTTTCGAACGCCAGGAGGTATACGGCTGGCTGTTCAAGAGCCGCCACCAGGGCGCCCGTGA > 7:291941/1‑147CAAGGTCCACCCGCTGGACCTGTGGCTGCTTGGCTACCTGCTGAAGAACCCGAGCTCGACACTGACCGAGATGATCAACGCCAGTCGTTACGAACGCCAGGAGGTATACGGCTGGCTGTTCAAGAGCCGCCACCAGGGCGCCCGTGACA > 8:196573/1‑149 ACCCGAGCTCGACACTGACCGAGATGATCAACGCCAGTCGTTTCGAACGCCAGGAGGTATACGGCTGGCTGTTCAAGAGCCGCCACCAGGGCGCCCGTGACAGCC > 5:10962/1‑105 ACCCGAGCTCGACACTGACCGAGATGATCAACGCCAGTCGTTTCGAACGCCAGGAGGTATACGGCTGGCTGTTCAAGAGCCGCCACCAGGGCGCCCGTGACAGCC < 6:10962/105‑1 CTGGCTGTTCAAGAGCCGCCACCAGGGCGCCCGTGACAGCCAGCCGTATACCTCCTGGCGTTCGAAACGAGTGGCGTTGATCATCTCGGTCAGTGTCGAGCTCGGGTTCTTCAGCAGGTAGCCAAGCAGCCACAGGTCCAGCGGGTGGA > 8:100780/1‑149 GCTGTTCAAGAGCCGCCACCAGGGCGCCCGTGACAGCCAGCCGTATACCTCCTGGCGTTCGAAACGACTGGCGTTGATCATCTCGGTCAGTGTCGAGCTCGGGTTCTTCAGCAGGTAG < 5:257096/118‑1 GCTGTTCAAGAGCCGCCACCAGGGCGCCCGTGACAGCCAGCCGTATACCTCCTGGCGTTCGAAACGACTGGCGTTGATCATCTCGGTCAGTGTCGAGCTCGGGTTCTTCAGCAGGTAG > 6:257096/1‑118 CAAGGTCCACCCGCTGGACCTGTGGCTGCTTGGCTACCTGCTGAAGAACCCGAGCTCGACACTGACCGAGATGATCAACGCCAGTCGTTTCGAACGCCAGGAGGTATACGGCTGGCTGTTCAAGAGCCGCCACCAGGGCGCCCGTGACAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1206706‑1206555‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagccAGCCGTATACCTCCTGGCGTTCGAAACGACTGGCGTTGATCATCTCGGTCAGTGTCGAGCTCGGGTTCTTCAGCAGGTAGCCAAGCAGCCACAGGTCCAGCGGGTGGA > NC_002947/1206594‑1206701 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |