New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1507992 = | 33 (0.660) | 3 (0.060) | 3/248 | NT | 8.5% | coding (393/462 nt) | sspB | ClpXP protease specificity‑enhancing factor |
? | NC_002947 | 1508041 = | 33 (0.680) | coding (442/462 nt) | sspB | ClpXP protease specificity‑enhancing factor |
AAACAAAAAAGGCGATCCATCCGGATCGCCTTTTTTTGTTACTTGACCACTTTCAGGCTTGGCCGGCCAGTCGGACGCGGCGGCTGCCCTCCATCGTCTGGCGGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1508099‑1507992 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTT > NC_002947/1508041‑1508146 AAACAAAAAAGGCGATCCATCCGGATCGCCTTTTTTTGTTACTTGACCACTTTCAGGCTTGGCCGGCCAGTCGGACGCGGCGGCTGCCCTCCATCGTCTGGCGGGC < 5:221789/106‑1 AAACAAAAAAGGCGATCCATCCGGATCGCCTTTTTTTGTTACTTGACCACTTTCAGGCTTGGCCGGCCAGTCGGACGCGGCGGCTGCCCTCCATCGTCTGGCGGGC > 6:221789/1‑106 TTGGCCGGCCAGTCGGACGCGGCGGCTGCCCTCCATCGTCTGGCGGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCG > 8:303784/1‑148 GCCGGCCAGTCGGACGCGGCGGCTGCCCTCCATCGTCTGGCGGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAA > 5:151967/1‑147 GCCAGTCGGACGCGGCGGCTGCCCTCCATCGTCTGGCGGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTT < 6:151967/149‑1 AAACAAAAAAGGCGATCCATCCGGATCGCCTTTTTTTGTTACTTGACCACTTTCAGGCTTGGCCGGCCAGTCGGACGCGGCGGCTGCCCTCCATCGTCTGGCGGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1508099‑1507992 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTT > NC_002947/1508041‑1508146 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |