New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1507992 =	33 (0.660)	3 (0.060)	3/248	NT	8.5%	coding (393/462 nt)	sspB	ClpXP protease specificity‑enhancing factor
	?	NC_002947	1508041 =	33 (0.680)					coding (442/462 nt)	sspB	ClpXP protease specificity‑enhancing factor

TCACTCGCTGTTCGTGCCGGTTGGTGCAATCCTGGGTATCTACGCCCGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCG  >  NC_002947/1507854‑1508138                                                                                                                                           |                                                                                                                                                   tCACTCGCTGTTCGTGCCGGTTGGTGCAATCCTGGGTATCTACGCCCGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGc                                                                                                                                             >  8:64251/1‑146 (MQ=255)    cTCGCTGTTCGTGCCGGTTGGTGCAATCCTGGGTATCTACGCCCGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGAc                                                                                                                                        >  5:110515/1‑148 (MQ=255)           ttCGTGCCTGTTGGTGCAATCCTGGGTATCTACGCCCGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGa                                                                                                                                  <  7:64251/147‑1 (MQ=255)             cGTGCCGGTTGGTGCAATCCTGGGTATCTACGCCCGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAggg                                                                                                                               <  8:301008/148‑1 (MQ=255)              gTGCCGGTTGGTGCAATCCTGGGTATCTACGCCCGCGAAAATGGCCAGGGTATCGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCa                                                                                                                             <  1:262893/149‑1 (MQ=255)                    gTTGGTGCAATCCTGGGTATCTACGCCCGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATgg                                                                                                                                   <  8:60483/137‑1 (MQ=255)                    gTTGGTGCAATCCTGGGTATCTACGCCCGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATgg                                                                                                                                   >  7:60483/1‑137 (MQ=255)                         tGCAATCCTGGGTATCTACGCCCGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGTAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTc                                                                                                                  >  2:11856/1‑149 (MQ=255)                                 aagctgttcgagtacatcgattgactcagtgattgcctggacaggccaaacaaaaaaggcgatccatccggatcgcctttttttgttacttgaccactttcaggctTGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTggc                                                                                                          <  6:151967‑M1/43‑1 (MQ=255)                                       ttcgagtacatcgattgactcagtgattgcctggacaggccaaacaaaaaaggcgatccatccggatcgcctttttttgttacttgaccactttcaggctTGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTggccggc                                                                                                      >  5:151967‑M1/101‑147 (MQ=255)                                         cgagtacatcgattgactcagtgattgcctggacaggccaaacaaaaaaggcgatccatccggatcgcctttttttgttacttgaccactttcaggctTGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCaa                                                                                                   >  8:303784‑M1/99‑148 (MQ=255)                                           cGCCCGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAg                                                                                                  <  3:233870/147‑1 (MQ=255)                                             cccGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCt                                                                                               >  3:142505/1‑148 (MQ=255)                                              ccGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTg                                                                                              >  1:128185/1‑148 (MQ=255)                                                 cgAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAg                                                                                          <  1:11856/149‑1 (MQ=255)                                                     aaTGGCCAGGGTTTGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGt                                                                                      <  7:123603/149‑1 (MQ=255)                                                      aTGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGt                                                                                      >  4:37416/1‑148 (MQ=255)                                                                 aTGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACaaa                                                                           >  3:206735/1‑148 (MQ=255)                                                                   ggTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACaaaaa                                                                         >  8:83815/1‑148 (MQ=255)                                                                       ttCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAACACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGc                                                                    >  4:157374/1‑149 (MQ=255)                                                                            gCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATcc                                                               >  4:87346/1‑149 (MQ=255)                                                                                        ttCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACt                                                                                                             <  1:46382/91‑1 (MQ=255)                                                                                        ttCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACt                                                                                                             >  2:46382/1‑91 (MQ=255)                                                                                           gatggatgGCGACGAGCTGGAACACGATGATGTTCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCATCCGGATCGCCttt                                                <  3:157374/149‑1 (MQ=255)                                                                                               gatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCtttttt                                             <  3:36672/148‑1 (MQ=255)                                                                                                    cgacgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTgg                                       >  5:73911/1‑149 (MQ=255)                                                                                                        gaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTg                                   >  8:70775/1‑149 (MQ=255)                                                                                                              gAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAgg                             <  4:142505/149‑1 (MQ=255)                                                                                                                      tgatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCggat                                                           >  5:6737/1‑111 (MQ=255)                                                                                                                      tgatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCggat                                                           <  6:6737/111‑1 (MQ=255)                                                                                                                      tgatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACt                     <  7:233257/149‑1 (MQ=255)                                                                                                                       gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACt                     <  6:110515/148‑1 (MQ=255)                                                                                                                         tgtgCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATGCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGa                   <  7:70775/148‑1 (MQ=255)                                                                                                                         tgtgCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAg                  <  1:219615/149‑1 (MQ=255)                                                                                                                               gCCGGATGACGATGGCCCGCCAGACGCTGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATc            <  3:3914/149‑1 (MQ=255)                                                                                                                                  ggATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGAt         <  3:87346/149‑1 (MQ=255)                                                                                                                                         gATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCg  <  4:206735/149‑1 (MQ=255)                                                                                                                                           |                                                                                                                                                   TCACTCGCTGTTCGTGCCGGTTGGTGCAATCCTGGGTATCTACGCCCGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCG  >  NC_002947/1507854‑1508138

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.