New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1507992 =	33 (0.660)	3 (0.060)	3/248	NT	8.5%	coding (393/462 nt)	sspB	ClpXP protease specificity‑enhancing factor
	?	NC_002947	1508041 =	33 (0.680)					coding (442/462 nt)	sspB	ClpXP protease specificity‑enhancing factor

TACGCCCGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTG  >  NC_002947/1507894‑1508176                                                                                                                                                    |                                                                                                                                        cgagtacatcgattgactcagtgattgcctggacaggccaaacaaaaaaggcgatccatccggatcgcctttttttgttacttgaccactttcaggctTGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCaa                                                                                                                                         >  8:303784‑M1/99‑148 (MQ=255)   cGCCCGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAg                                                                                                                                        <  3:233870/147‑1 (MQ=255)     cccGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCt                                                                                                                                     >  3:142505/1‑148 (MQ=255)      ccGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTg                                                                                                                                    >  1:128185/1‑148 (MQ=255)         cgAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAg                                                                                                                                <  1:11856/149‑1 (MQ=255)             aaTGGCCAGGGTTTGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGt                                                                                                                            <  7:123603/149‑1 (MQ=255)              aTGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGt                                                                                                                            >  4:37416/1‑148 (MQ=255)                         aTGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACaaa                                                                                                                 >  3:206735/1‑148 (MQ=255)                           ggTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACaaaaa                                                                                                               >  8:83815/1‑148 (MQ=255)                               ttCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAACACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGc                                                                                                          >  4:157374/1‑149 (MQ=255)                                    gCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATcc                                                                                                     >  4:87346/1‑149 (MQ=255)                                                   gatggatgGCGACGAGCTGGAACACGATGATGTTCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCATCCGGATCGCCttt                                                                                      <  3:157374/149‑1 (MQ=255)                                                       gatggCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCtttttt                                                                                   <  3:36672/148‑1 (MQ=255)                                                            cgacgaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTgg                                                                             >  5:73911/1‑149 (MQ=255)                                                                gaGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTg                                                                         >  8:70775/1‑149 (MQ=255)                                                                      gAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAgg                                                                   <  4:142505/149‑1 (MQ=255)                                                                              tgatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCggat                                                                                                 >  5:6737/1‑111 (MQ=255)                                                                              tgatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCggat                                                                                                 <  6:6737/111‑1 (MQ=255)                                                                              tgatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACt                                                           <  7:233257/149‑1 (MQ=255)                                                                               gatgTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACt                                                           <  6:110515/148‑1 (MQ=255)                                                                                 tgtgCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATGCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGa                                                         <  7:70775/148‑1 (MQ=255)                                                                                 tgtgCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAg                                                        <  1:219615/149‑1 (MQ=255)                                                                                       gCCGGATGACGATGGCCCGCCAGACGCTGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATc                                                  <  3:3914/149‑1 (MQ=255)                                                                                          ggATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGAt                                               <  3:87346/149‑1 (MQ=255)                                                                                                 gATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCg                                        <  4:206735/149‑1 (MQ=255)                                                                                                  ttggccggccagtcggacgcggcggctgccctccatcgtctggcgggccaAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCg                                        >  8:303784‑M2/51‑148 (MQ=255)                                                                                                     gccggccagtcggacgcggcggctgccctccatcgtctggcgggccaAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGaa                                      >  5:151967‑M2/48‑147 (MQ=255)                                                                                                     GCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTtttgttt                                                                               >  6:221789‑M1/1‑106 (MQ=255)                                                                                                     GCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTtttgttt                                                                               <  5:221789‑M1/106‑1 (MQ=255)                                                                                                         gccagtcggacgcggcggctgccctccatcgtctggcgggccaAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCtt                                <  6:151967‑M2/106‑1 (MQ=255)                                                                                                           cAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTc                                         >  2:248770/1‑138 (MQ=255)                                                                                                           cAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTc                                         <  1:248770/138‑1 (MQ=255)                                                                                                              aCGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTATCAAAAAAAGGCGATCGGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATGACTGAGTCAATCGATGTACTCGAAGAGCTTGACGa                           >  6:84410/1‑149 (MQ=255)                                                                                                                 aTGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCGTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCCATGTACTCGAACAGCTTGACGAtct                        >  6:9108/1‑149 (MQ=255)                                                                                                                   ggAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCATGTACAGGCAATCACTGAGTCAATCGATGTACTCTAACAGCTTGACGAtattc                      >  5:312545/1‑149 (MQ=255)                                                                                                                         cAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACg                >  2:256498/1‑149 (MQ=255)                                                                                                                           gccgccGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGcc              <  7:252185/149‑1 (MQ=255)                                                                                                                               ccgcGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGa           >  8:90739/1‑148 (MQ=255)                                                                                                                                       gACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTg  <  7:83815/149‑1 (MQ=255)                                                                                                                                       gACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTg  >  2:287682/1‑149 (MQ=255)                                                                                                                                       gACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATACGGACGGATCGCCTTTTTTGTTTGGCCTGTCAAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCGTGACGATCTTCTGCACGCCCGAAACCCCCTg  >  6:196377/1‑149 (MQ=255)                                                                                                                                            gccggccAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTg  <  4:27538/144‑1 (MQ=255)                                                                                                                                            gccggccAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTg  >  3:27538/1‑144 (MQ=255)                                                                                                                                                    |                                                                                                                                        TACGCCCGCGAAAATGGCCAGGGTATGGTCTTCGAGCTGGAGCCGTCTTCGATGGATGGCGACGAGCTGGAAGACGATGATGTGCAGCCGGATGACGATGGCCCGCCAGACGATGGAGGGCAGCCGCCGCGTCCGACTGGCCGGCCAAGCCTGAAAGTGGTCAAGTAACAAAAAAAGGCGATCCGGATGGATCGCCTTTTTTGTTTGGCCTGTCCAGGCAATCACTGAGTCAATCGATGTACTCGAACAGCTTGACGATCTTCTGCACGCCCGAAACACCCTG  >  NC_002947/1507894‑1508176

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.