New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1569612	48 (0.950)	3 (0.060)	3/248	NT	5.5%	coding (423/1203 nt)	pcaF‑I	beta‑ketoadipyl‑CoA thiolase
	?	NC_002947	= 1569671	56 (1.160)					coding (482/1203 nt)	pcaF‑I	beta‑ketoadipyl‑CoA thiolase

CGGGCATGGATGCCGTCGGCACCGCGTTCCGCGCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1569464‑1569612 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggaaTCCACACCGTACTGGCTCTTCATCAGCGGGTTGATGAAACGCCAGCCAATGGTGGTGTCTTCCAGCTTCATGTTGCGCGAATAGGCGCTTTCAGCCTTGCCCATGACGAACGGGGCGCGCGACATCGACTCGACGCCACCGGCA  <  NC_002947/1569671‑1569528                                                                                                                                                                                                                                                                                                       CGGGCATGGATGCCGTCGGCACCGCGTTCCGCGCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAA                                                                                                                                                  <  4:228608/149‑1                               GCGCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAATCCACACCGTACTGGCTCTTCATCAGCGGG                                                                                                                    >  8:43811/1‑149                                                                 TGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAATCCACACCGTACTGGCTCTTCATCAGCGGGTTGATGAAACGCCAGCCAATGGTGGTGTCTTCC                                                                                   <  8:83013/148‑1                                                                   CCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAATCCACACCGTACTGGCTCTTCATCAGCGGGTTGATGAAACGCCAGCCAATGGTGGTGTCTTCCAG                                                                                 <  7:43811/148‑1                                                                                                                                                 TGGAATCCACACCGTACTCGCTCTTCATCAGCGCGTTGATGAAACGCCAGCCAATGGTGGTGTCTTCCAGCTTCATGTTGCGCGAATAGGCGCTTTCAGCCTTGCCCATGACGAACGGGGCGCGCGACATCGACTCGACGCCACCGGCA  <  5:245584/149‑1                                                                                                                                                                                                                                                                                                       CGGGCATGGATGCCGTCGGCACCGCGTTCCGCGCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1569464‑1569612 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggaaTCCACACCGTACTGGCTCTTCATCAGCGGGTTGATGAAACGCCAGCCAATGGTGGTGTCTTCCAGCTTCATGTTGCGCGAATAGGCGCTTTCAGCCTTGCCCATGACGAACGGGGCGCGCGACATCGACTCGACGCCACCGGCA  <  NC_002947/1569671‑1569528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.