New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1569612	48 (0.950)	3 (0.060)	3/248	NT	5.5%	coding (423/1203 nt)	pcaF‑I	beta‑ketoadipyl‑CoA thiolase
	?	NC_002947	= 1569671	56 (1.160)					coding (482/1203 nt)	pcaF‑I	beta‑ketoadipyl‑CoA thiolase

TGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTAT  >  NC_002947/1569528‑1569818                                                                                                                                                |                                                                                                                                                    tGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACGCGCTGATGAAGAGCGAGTACGGTGTGGAttcca                                                                                                                                                <  5:245584‑M2/149‑6 (MQ=255)    cGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGc                                                                                                                                             <  7:155429/149‑1 (MQ=255)      gTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCg                                                                                                                                           <  8:190437/149‑1 (MQ=255)                gtcgaTGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAAccgcc                                                                                                                                  >  7:13023/1‑148 (MQ=255)                 tcgaTGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAAccgccg                                                                                                                                 <  6:158809/148‑1 (MQ=255)                    aTGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACaa                                                                                                                             >  6:66930/1‑149 (MQ=255)                         gcgcgcCCCGTTCGTCATGGGCAACGCTGAAACCGCATATTCGCGAAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTgg                                                                                                                        <  6:245584/149‑1 (MQ=255)                          cgcgcCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGc                                                                                                                       <  4:117406/149‑1 (MQ=255)                           gcgcCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGcc                                                                                                                      <  3:10769/149‑1 (MQ=255)                             gcCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCcga                                                                                                                    <  8:73867/149‑1 (MQ=255)                                 cGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCgacgac                                                                                                                >  6:4830/1‑149 (MQ=255)                                       tCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAg                                                                                                          >  6:260892/1‑149 (MQ=255)                                       acATGCGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACCCCACCAATGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGCTGTGGATTCCCTGCCGGAACCCGCCGACAACGTGGCCGACGACTATCAg                                                                                                          >  6:41369/2‑149 (MQ=255)                                            ggCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAAc                                                                                                                            <  6:149234/126‑1 (MQ=255)                                            ggCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAAc                                                                                                                            >  5:149234/1‑126 (MQ=255)                                              cAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTcgc                                                                                                   <  3:46242/149‑1 (MQ=255)                                                 ggCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTg                                                                                                <  2:150251/149‑1 (MQ=255)                                                  gCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGc                                                                                               <  5:27499/149‑1 (MQ=255)                                                      aaaGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGGCGACTATCAGGTTTCGCGTGCTGa                                                                                            >  8:204174/1‑148 (MQ=255)                                                             cTATTCGCGCAACATGAAGCTGGATGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACg                                                                                    <  2:210427/149‑1 (MQ=255)                                                               aTTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGc                                                                                                                       <  8:43540/112‑1 (MQ=255)                                                               aTTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGc                                                                                                                       >  7:43540/1‑112 (MQ=255)                                                                ttCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCtt                                                                                 >  6:240971/1‑149 (MQ=255)                                                                   gcgcAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCg                                                                              >  6:95855/1‑149 (MQ=255)                                                                    cgcAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGc                                                                             <  5:95855/149‑1 (MQ=255)                                                                         cATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTgc                                                                        >  6:47337/1‑149 (MQ=255)                                                                         cATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTgc                                                                        <  5:77839/149‑1 (MQ=255)                                                                          aTGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTgcg                                                                       >  2:277656/1‑149 (MQ=255)                                                                             aaGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGca                                                                     <  8:13023/148‑1 (MQ=255)                                                                                cTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGAttccagcttcatgttgcgcgaataggcgctttcagccttgcccatgacgaacggggcgcgcgacatcgactcgacgccaccgg                                                                  <  7:43811‑M2/148‑84 (MQ=255)                                                                                 tGGAAGACACCACCATTGGCGTGCGTTTCTTCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAAGTTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGcagccag                                                                <  5:41369/149‑1 (MQ=255)                                                                                  ggAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGAttccagcttcatgttgcgcgaataggcgctttcagccttgcccatgacgaacggggcgcgcgacatcgactcgacgccaccggca                                                                <  8:83013‑M2/148‑86 (MQ=255)                                                                                   gAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGcagccag                                                                >  5:333465/1‑147 (MQ=255)                                                                                    aaGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGcagccag                                                                >  4:154564/1‑146 (MQ=255)                                                                                      gACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGaa                                                           <  5:4830/149‑1 (MQ=255)                                                                                         accaccATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTcgc                                                                                                   >  6:325064/1‑106 (MQ=255)                                                                                         accaccATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTcgc                                                                                                   <  5:325064/106‑1 (MQ=255)                                                                                         accaccATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGcagccagc                                                               <  4:66554/142‑1 (MQ=255)                                                                                         accaccATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGcagccagc                                                               >  3:66554/1‑142 (MQ=255)                                                                                         accaccATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGc                                                        >  7:217264/1‑149 (MQ=255)                                                                                          ccaccaTTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCt                                                       <  3:154564/149‑1 (MQ=255)                                                                                                   gctggcGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTgcg                                              >  1:257016/1‑149 (MQ=255)                                                                                                    ctggcGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGGCGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTgcgc                                             <  7:204174/149‑1 (MQ=255)                                                                                                          tttCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATc                                                                                          <  5:73963/98‑1 (MQ=255)                                                                                                          tttCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATc                                                                                          >  6:73963/1‑98 (MQ=255)                                                                                                             catcaACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCa                                                                                                           <  8:237074/78‑1 (MQ=255)                                                                                                             catcaACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCa                                                                                                           >  7:237074/1‑78 (MQ=255)                                                                                                             catcaACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCg                                    >  5:91723/1‑149 (MQ=255)                                                                                                              atcaACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATc                                                                                                            >  2:91519/1‑76 (MQ=255)                                                                                                              atcaACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATc                                                                                                            <  1:91519/76‑1 (MQ=255)                                                                                                               tcaACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCTCAGGCTGCCGGc                                  <  6:333465/149‑1 (MQ=255)                                                                                                               tcaACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGc                                  >  2:129553/1‑149 (MQ=255)                                                                                                                 aaCCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGctt                                <  2:257016/149‑1 (MQ=255)                                                                                                                   cccGCTGATGAAGAGCCAGTACGGTGTGGAttccagcttcatgttgcgcgaataggcgctttcagccttgcccatgacgaacggggcgcgcgacatcgactcgacgccaccggcaatcaccagctccatctcgccgctggcgatggcgc                              >  8:43811‑M2/1‑30 (MQ=255)                                                                                                                    ccGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCCCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGcttctt                             >  1:225935/1‑149 (MQ=255)                                                                                                                     cGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCttt                            >  7:168556/1‑149 (MQ=255)                                                                                                                         gatgaAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGcc                         >  7:231103/1‑148 (MQ=255)                                                                                                                          atgaAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCg                        >  1:40644/1‑148 (MQ=255)                                                                                                                          atgaAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCg                        >  7:136834/1‑148 (MQ=255)                                                                                                                                     gTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGc            <  2:225935/149‑1 (MQ=255)                                                                                                                                         ggTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGt        <  1:129553/149‑1 (MQ=255)                                                                                                                                           tgtgGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGc      <  5:2453/149‑1 (MQ=255)                                                                                                                                            gtgGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGc      <  8:217264/148‑1 (MQ=255)                                                                                                                                               gATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGCCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTAt  >  7:94940/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                    TGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAGAAGGCTGCCGCTGCGCAGGCTGCCGGCTTCTTTGCCGAAGAAATCGTGCCGGTGCGTAT  >  NC_002947/1569528‑1569818

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.