New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1569612	48 (0.950)	3 (0.060)	3/248	NT	5.5%	coding (423/1203 nt)	pcaF‑I	beta‑ketoadipyl‑CoA thiolase
	?	NC_002947	= 1569671	56 (1.160)					coding (482/1203 nt)	pcaF‑I	beta‑ketoadipyl‑CoA thiolase

CGGGCATGGATGCCGTCGGCACCGCGTTCCGCGCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAG  >  NC_002947/1569464‑1569756                                                                                                                                                     |                                                                                                                                                 cGGGCATGGATGCCGTCGGCACCGCGTTCCGCGCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAA                                                                                                                                                  <  4:228608‑M1/149‑1 (MQ=255)    gCATGGATGCCGTCGGCACCGCGTTCCGCGCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGac                                                                                                                                               <  3:5678/149‑1 (MQ=255)    gCATGGATGCCGTCGGCACCGCGTTCCGCGCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGa                                                                                                                                                >  1:150251/1‑148 (MQ=255)     cATGGATGCCGTCGGCACCGCGTTCCGCGCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGaca                                                                                                                                              >  6:77839/1‑149 (MQ=255)       tGGATGCCGTCGGCACCGCGTTCCGCGCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGAcacc                                                                                                                                            <  7:241635/149‑1 (MQ=255)         gATGCCGTCGGCACCGCGTTCCGCGCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGAcaccac                                                                                                                                          >  8:132655/1‑149 (MQ=255)         gATGCCGTCGGCACCGCGTTCCGCGCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGAcacca                                                                                                                                           <  5:205738/148‑1 (MQ=255)          aTGCCGTCGGCACCGCGTTCCGCGCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGAcaccac                                                                                                                                          >  7:190437/1‑148 (MQ=255)                tCGGCACCGCGTTCCGCGCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATtggc                                                                                                                                   <  6:153819/149‑1 (MQ=255)                 cGGCACCGCGTTCCGCGCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATtggct                                                                                                                                  <  2:165606/149‑1 (MQ=255)                      ccGCGTTCCGCGCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATtggctggc                                                                                                                               <  1:128595/147‑1 (MQ=255)                      ccGCGTTCCGCGCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGt                                                                                                                             >  6:2453/1‑149 (MQ=255)                         cgTTCCGCGCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGTCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTtc                                                                                                                          <  2:36670/149‑1 (MQ=255)                           ttCCGCGCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTtcat                                                                                                                        <  8:54002/149‑1 (MQ=255)                              cgcgCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTtcatca                                                                                                                      <  3:7596/148‑1 (MQ=255)                               gcgcCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAtccacaccgtactggctcttcatcagcggg                                                                                                                    >  8:43811‑M1/1‑119 (MQ=255)                                     tCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCtg                                                                                                              <  5:145451/149‑1 (MQ=255)                                       gCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCtgat                                                                                                            <  7:132655/149‑1 (MQ=255)                                             ggcgAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAagag                                                                                                      >  8:155429/1‑149 (MQ=255)                                              gcgAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGc                                                                                                     <  4:208799/149‑1 (MQ=255)                                                  gaTGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAg                                                                                                  >  7:73867/1‑148 (MQ=255)                                                     ggAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACg                                                                                              >  3:117406/1‑149 (MQ=255)                                                           ggTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGgt                                                                                            <  5:303166/145‑1 (MQ=255)                                                           ggTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGgt                                                                                            >  6:303166/1‑145 (MQ=255)                                                           ggTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCACCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGATGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGtgtg                                                                                         >  1:210427/1‑148 (MQ=255)                                                                 tGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAtccacaccgtactggctcttcatcagcgggttgatgaaacgccagccaatggtggtgtcttcc                                                                                   <  8:83013‑M1/148‑64 (MQ=255)                                                                 tGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACGCGCTGATGAAGAGCGAGTACGGTGTGGAttcca                                                                                  <  5:245584‑M2/149‑6 (MQ=255)                                                                   ccGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAtccacaccgtactggctcttcatcagcgggttgatgaaacgccagccaatggtggtgtcttccag                                                                                 <  7:43811‑M1/148‑66 (MQ=255)                                                                    cGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGc                                                                               <  7:155429/149‑1 (MQ=255)                                                                      gTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCg                                                                             <  8:190437/149‑1 (MQ=255)                                                                                gtcgaTGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAAccgcc                                                                    >  7:13023/1‑148 (MQ=255)                                                                                 tcgaTGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAAccgccg                                                                   <  6:158809/148‑1 (MQ=255)                                                                                    aTGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACaa                                                               >  6:66930/1‑149 (MQ=255)                                                                                         gcgcgcCCCGTTCGTCATGGGCAACGCTGAAACCGCATATTCGCGAAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTgg                                                          <  6:245584/149‑1 (MQ=255)                                                                                          cgcgcCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGc                                                         <  4:117406/149‑1 (MQ=255)                                                                                           gcgcCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGcc                                                        <  3:10769/149‑1 (MQ=255)                                                                                             gcCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCcga                                                      <  8:73867/149‑1 (MQ=255)                                                                                                 cGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCgacgac                                                  >  6:4830/1‑149 (MQ=255)                                                                                                       tCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAg                                            >  6:260892/1‑149 (MQ=255)                                                                                                       acATGCGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACCCCACCAATGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGCTGTGGATTCCCTGCCGGAACCCGCCGACAACGTGGCCGACGACTATCAg                                            >  6:41369/2‑149 (MQ=255)                                                                                                            ggCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAAc                                                              <  6:149234/126‑1 (MQ=255)                                                                                                            ggCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAAc                                                              >  5:149234/1‑126 (MQ=255)                                                                                                              cAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTcgc                                     <  3:46242/149‑1 (MQ=255)                                                                                                                 ggCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTg                                  <  2:150251/149‑1 (MQ=255)                                                                                                                  gCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGc                                 <  5:27499/149‑1 (MQ=255)                                                                                                                      aaaGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGGCGACTATCAGGTTTCGCGTGCTGa                              >  8:204174/1‑148 (MQ=255)                                                                                                                             cTATTCGCGCAACATGAAGCTGGATGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACg                      <  2:210427/149‑1 (MQ=255)                                                                                                                               aTTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGc                                                         >  7:43540/1‑112 (MQ=255)                                                                                                                               aTTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGc                                                         <  8:43540/112‑1 (MQ=255)                                                                                                                                ttCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCtt                   >  6:240971/1‑149 (MQ=255)                                                                                                                                   gcgcAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCg                >  6:95855/1‑149 (MQ=255)                                                                                                                                    cgcAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGc               <  5:95855/149‑1 (MQ=255)                                                                                                                                         cATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTgc          >  6:47337/1‑149 (MQ=255)                                                                                                                                         cATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTgc          <  5:77839/149‑1 (MQ=255)                                                                                                                                          aTGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTgcg         >  2:277656/1‑149 (MQ=255)                                                                                                                                             aaGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGca       <  8:13023/148‑1 (MQ=255)                                                                                                                                                cTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGAttccagcttcatgttgcgcgaataggcgctttcagccttgcccatgacgaacggggcgcgcgacatcgactcgacgccaccgg    <  7:43811‑M2/148‑84 (MQ=255)                                                                                                                                                 tGGAAtccacaccgtactcgctcttcatcagcgcgttgatgaaacgccagccaatggtggtgtcttccagcttcatgttgcgcgaataggcgctttcagccttgcccatgacgaacggggcgcgcgacatcgactcgacgccaccggca  <  5:245584‑M1/149‑145 (MQ=255)                                                                                                                                                 tGGAAGACACCACCATTGGCGTGCGTTTCTTCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAAGTTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGcagccag  <  5:41369/149‑1 (MQ=255)                                                                                                                                                  ggAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGAttccagcttcatgttgcgcgaataggcgctttcagccttgcccatgacgaacggggcgcgcgacatcgactcgacgccaccggca  <  8:83013‑M2/148‑86 (MQ=255)                                                                                                                                                   gAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGcagccag  >  5:333465/1‑147 (MQ=255)                                                                                                                                                    aaGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGcagccag  >  4:154564/1‑146 (MQ=255)                                                                                                                                                     |                                                                                                                                                 CGGGCATGGATGCCGTCGGCACCGCGTTCCGCGCCATCGCCAGCGGCGAGATGGAGCTGGTGATTGCCGGTGGCGTCGAGTCGATGTCGCGCGCCCCGTTCGTCATGGGCAAGGCTGAAAGCGCCTATTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGCTGATGAAGAGCCAGTACGGTGTGGATTCCATGCCGGAAACCGCCGACAACGTGGCCGACGACTATCAGGTTTCGCGTGCTGATCAGGACGCTTTCGCCCTGCGCAGCCAG  >  NC_002947/1569464‑1569756

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.