New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 161684938 (0.750)6 (0.120) 4/246 NT 14.2% coding (410/1515 nt) PP_1416 tricarboxylate transport protein TctA
?NC_002947 = 1616879 36 (0.750)coding (380/1515 nt) PP_1416 tricarboxylate transport protein TctA

GCGTCGATGCCGACCGCCGAGAGGAACAGGCCGATGAGAGCGGCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1616696‑1616849
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccaCCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCGAAATGGGCCATCGCCTTCGGCCCGGCGGAGTACTTTGTGCTGATGGTGTTCGCCATCGTCGCGTTGGGTGGCATGGCCGGTGACAAACCACTGAAAACCTTCATTGCCGCTC  <  NC_002947/1616879‑1616733
                                                                                                                                                                                                                                                                                                             
GCGTCGATGCCGACCGCCGAGAGGAACAGGCCGATGAGAGCGGCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTT                                                                                                                                                          <  1:138817/149‑1
  GTCGATGCCGACCGCCGAGAGGAACAGGCCGATGAGAGAGGCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCG                                                                                                                                                        >  5:47659/1‑149
                                        CGGCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCACCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCG                                                                                                                  <  3:162128/149‑1
                                            AATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCACCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCGAAAT                                                                                                              <  4:147162/149‑1
                                            AATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAACACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCACCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCGAAAT                                                                                                              >  5:217080/1‑149
                                            AATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAACACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCACCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCGAAAT                                                                                                              >  7:161257/1‑149
                                              TGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAACACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCACCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCGAAATGG                                                                                                            <  6:217080/149‑1
                                              TGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAACACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCACCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCGAAATGG                                                                                                            <  8:161257/149‑1
                                                                                                                                                    TCGCCACCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCGAAATGGGCCATCGCCTTCGGCCCGGCGGAGTACTTTGTGCTGATGGTGTTCGCCATCGTCGCGTTGGGTGGCATGGCCGGTGACAAACCACTGAAAACCTTCATTGCC      >  4:299502/1‑149
                                                                                                                                                    TCGCCACCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCGAAATGGGCCATCGCCTTCGGCCCGGCGGAGTACTTTGTGCTGATGGTGTTCGCCATCGTCGCGTTGGGTGGCATGGCCGGTGACAAA                           >  7:145509/1‑128
                                                                                                                                                    TCGCCACCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCGAAATGGGCCATCGCCTTCGGCCCGGCGGAGTACTTTGTGCTGATGGTGTTCGCCATCGTCGCGTTGGGTGGCATGGCCGGTGACAAA                           <  8:145509/128‑1
                                                                                                                                                      GCCACCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCGAAATGGGCCATCGCCTTCGGCCCGGCGGAGTACTTTGTGCTGATGGTGTTCGCCATCGTCGCGTTGGGTGGCATGGCCGGTGACAAACCACTGAAAACCTTCATTGCCG     <  6:245287/148‑1
                                                                                                                                                        CACCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCGAAATGGGCCATCGCCTTCGGCCCGGCGGAGTACTTTGTGCTGATGGTGTTCGCCATCGTCGCGTTGGGTGGCATGGCCGGTGACAAACCACTGAAAACCTTCATTGCCGCTC  <  7:289023/149‑1
                                                                                                                                                                                                                                                                                                             
GCGTCGATGCCGACCGCCGAGAGGAACAGGCCGATGAGAGCGGCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1616696‑1616849
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccaCCTGCGGCATGGTGCTGTTCGCCCCGCTGCTGGCGAAATGGGCCATCGCCTTCGGCCCGGCGGAGTACTTTGTGCTGATGGTGTTCGCCATCGTCGCGTTGGGTGGCATGGCCGGTGACAAACCACTGAAAACCTTCATTGCCGCTC  <  NC_002947/1616879‑1616733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.