New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1616849	38 (0.750)	6 (0.120)	4/246	NT	14.2%	coding (410/1515 nt)	PP_1416	tricarboxylate transport protein TctA
	?	NC_002947	= 1616879	36 (0.750)					coding (380/1515 nt)	PP_1416	tricarboxylate transport protein TctA

AACAGGCCGATGAGAGCGGCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCGGCCAGGCCCTGGCGGGCCATCGGGTAACCATCGAGGGTGGTCATGACGGTCGAGGCTTCGC  >  NC_002947/1616720‑1616996                                                                                                                                  |                                                                                                                                                    aaCAGGCCGATGAGAGCGGCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCAc                                                                                                                                  <  6:257115/149‑1 (MQ=255)  aCAGGCCGATGAGAGCGGCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCAc                                                                                                                                  >  5:54282/1‑148 (MQ=255)          aTGAGAGCGGCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCa                                                                                                                         <  3:174140/149‑1 (MQ=255)           tGAGAGCGGCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCACCGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCCTGCCGCAg                                                                                                                        >  2:247459/1‑149 (MQ=255)              gagCGGCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGtg                                                                                                                     <  7:289023‑M2/149‑3 (MQ=255)                 cGGCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAcctgcggcatggtgctgttcgccccgctgctggcg                                                                                                                  <  3:162128‑M1/149‑36 (MQ=255)                 cGGCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGtggc                                                                                                                   <  6:245287‑M2/148‑5 (MQ=255)                  ggCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGtggcga                                                                                                                 >  4:299502‑M2/1‑143 (MQ=255)                     aaTGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAcctgcggcatggtgctgttcgccccgctgctggcgaaat                                                                                                              <  4:147162‑M1/149‑40 (MQ=255)                     aaTGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAACACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAcctgcggcatggtgctgttcgccccgctgctggcgaaat                                                                                                              >  5:217080‑M1/1‑110 (MQ=255)                     aaTGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAACACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAcctgcggcatggtgctgttcgccccgctgctggcgaaat                                                                                                              >  7:161257‑M1/1‑110 (MQ=255)                       tGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAg                                                                                                            <  6:47659/149‑1 (MQ=255)                       tGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAg                                                                                                            <  8:289023/149‑1 (MQ=255)                       tGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAACACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAcctgcggcatggtgctgttcgccccgctgctggcgaaatgg                                                                                                            <  6:217080‑M1/149‑42 (MQ=255)                       tGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAACACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAcctgcggcatggtgctgttcgccccgctgctggcgaaatgg                                                                                                            <  8:161257‑M1/149‑42 (MQ=255)                                   gTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATgaac                                                                                                <  6:275839/149‑1 (MQ=255)                                   gTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATgaac                                                                                                <  5:245287/149‑1 (MQ=255)                                      ggttGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGGACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATgaacgaa                                                                                             <  8:89903/147‑1 (MQ=255)                                       tttGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGtggcga                                                                                                                 >  7:145509‑M2/1‑122 (MQ=255)                                       tttGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGtggcga                                                                                                                 <  8:145509‑M2/128‑7 (MQ=255)                                             aCCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAgg                                                                                      >  3:287958/1‑149 (MQ=255)                                              ccGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGc                                                                                                                                    >  6:51082/1‑102 (MQ=255)                                              ccGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGc                                                                                                                                    <  5:51082/102‑1 (MQ=255)                                                          cccAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCcgacagcgacag                                                                         <  4:287958/149‑1 (MQ=255)                                                            cAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAggg                                                                       <  5:285570/149‑1 (MQ=255)                                                             aaCGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATgaac                                                                                                <  5:272061/123‑1 (MQ=255)                                                             aaCGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATgaac                                                                                                >  6:272061/1‑123 (MQ=255)                                                                      aTGTCGAACACCATCAGAACAAAGTACTCCGCCGGGCCGACGGAGATGGCACATTTCGCCAGCAGAGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCGGc                                                             <  2:307285/149‑1 (MQ=255)                                                                          cGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCcgacag                                                                               >  1:82175/1‑127 (MQ=255)                                                                          cGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCcgacag                                                                               <  2:82175/127‑1 (MQ=255)                                                                           gAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCg                                                               <  7:226225/142‑1 (MQ=255)                                                                           gAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCg                                                               >  8:226225/1‑142 (MQ=255)                                                                              cacCATCAGCGCAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCGGCCAGGCCCt                                                     >  8:178467/1‑149 (MQ=255)                                                                                       cacaAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCGGCCAGGCCCTGGCGGGCCa                                            >  2:298299/1‑149 (MQ=255)                                                                                         caAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCGGCCAGGCCCTGGCGGGCCATc                                          >  2:287734/1‑149 (MQ=255)                                                                                         caAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCGGCCAGGCCCTGGCGGGCCATc                                          <  6:54282/149‑1 (MQ=255)                                                                                          aaaGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCGGCCAGGCCCTGGCGGGCCATCg                                         <  7:178467/149‑1 (MQ=255)                                                                                           aaGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCGGCCAGGCCCTGGCGGGCCATCgg                                        >  6:280988/1‑149 (MQ=255)                                                                                           aaGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCGGCCAGGCCCTGGCGGGCCATCgg                                        <  1:247459/149‑1 (MQ=255)                                                                                           aaGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGAAGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCGGCCAGGCCCTGGCGGGCCATCgg                                        <  7:83798/149‑1 (MQ=255)                                                                                            aGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCGGCCAGGCCCTGGCGGGCCATCggg                                       >  5:290789/1‑149 (MQ=255)                                                                                              tACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCGGCCAGGCCCTGGCGGGCCATCGGGTa                                     <  1:287734/149‑1 (MQ=255)                                                                                                          ccGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCGGCCAGGCCCTGGCGGGCCATCGGGTAACCATCGAGggt                         >  7:164646/1‑149 (MQ=255)                                                                                                                       cccATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCGGcc                                                            <  8:164929/101‑1 (MQ=255)                                                                                                                       cccATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCGGcc                                                            >  7:164929/1‑101 (MQ=255)                                                                                                                       cccATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCGGCCAGGCCCTGGCGGGCCATCGGGTAACCATCGAGGGTGGTCATGACGGTc            <  6:290789/149‑1 (MQ=255)                                                                                                                        ccATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGtggcgaaatgggccatcgccttcggcccggcggagtactttgtgttgatggtgttcgccatcgtcgcgttgggtggcatggccggtgacaaaccactgaaaaccttca           <  8:161257‑M2/149‑109 (MQ=255)                                                                                                                        ccATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGtggcgaaatgggccatcgccttcggcccggcggagtactttgtgttgatggtgttcgccatcgtcgcgttgggtggcatggccggtgacaaaccactgaaaaccttca           <  6:217080‑M2/149‑109 (MQ=255)                                                                                                                          aTTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGtggcgaaatgggccatcgccttcggcccggcggagtactttgtgttgatggtgttcgccatcgtcgcgttgggtggcatggccggtgacaaaccactgaaaaccttcatt         >  7:161257‑M2/1‑39 (MQ=255)                                                                                                                          aTTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGtggcgaaatgggccatcgccttcggcccggcggagtactttgtgttgatggtgttcgccatcgtcgcgttgggtggcatggccggtgacaaaccactgaaaaccttcatt         >  5:217080‑M2/1‑39 (MQ=255)                                                                                                                          aTTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGtggcgaaatgggccatcgccttcggcccggcggagtactttgtgctgatggtgttcgccatcgtcgcgttgggtggcatggccggtgacaaaccactgaaaaccttcatt         <  4:147162‑M2/149‑111 (MQ=255)                                                                                                                          aTTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCGGCCAGGCCCTGGCGGGCCATCGGGTAACCATCGAGGGTGGTCATGCCGGTCGAg         >  7:138765/1‑149 (MQ=255)                                                                                                                           tttCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCGGCCAGGCCCTGGCGGGCCATCGGGTAACCATCGAGGGTGGTCATGACGGTCGAgg        <  5:280988/149‑1 (MQ=255)                                                                                                                             tCGCCAcctgcggcatggtgctgttcgccccgctgctggcgaaatgggccatcgccttcggcccggcggagtactttgtgctgatggtgttcgccatcgtcgcgttgggtggcatggccggtgacaaaccactgaaaaccttcattgcc      >  4:299502‑M1/1‑6 (MQ=255)                                                                                                                             tCGCCAcctgcggcatggtgctgttcgccccgctgctggcgaaatgggccatcgccttcggcccggcggagtactttgtgctgatggtgttcgccatcgtcgcgttgggtggcatggccggtgacaaa                           <  8:145509‑M1/128‑123 (MQ=255)                                                                                                                             tCGCCAcctgcggcatggtgctgttcgccccgctgctggcgaaatgggccatcgccttcggcccggcggagtactttgtgctgatggtgttcgccatcgtcgcgttgggtggcatggccggtgacaaa                           >  7:145509‑M1/1‑6 (MQ=255)                                                                                                                             tCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCGGCCAGGCCCTGGCGGGCCATCGGGTAACCATCGAGGGTGGTCATGACGGTCGAGGc       <  8:164646/148‑1 (MQ=255)                                                                                                                              cGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGtggcgaaatgggccatcgccttcggcccggcggagtactttgtgctgatggtgttcgccatcgtcgcgttgggtggcatggccggtgacaaaccactgaaaaccttcattgccg     <  3:162128‑M2/149‑115 (MQ=255)                                                                                                                               gCCAcctgcggcatggtgctgttcgccccgctgctggcgaaatgggccatcgccttcggcccggcggagtactttgtgctgatggtgttcgccatcgtcgcgttgggtggcatggccggtgacaaaccactgaaaaccttcattgccg     <  6:245287‑M1/148‑145 (MQ=255)                                                                                                                                 cAcctgcggcatggtgctgttcgccccgctgctggcgaaatgggccatcgccttcggcccggcggagtactttgtgctgatggtgttcgccatcgtcgcgttgggtggcatggccggtgacaaaccactgaaaaccttcattgccgctc  <  7:289023‑M1/149‑148 (MQ=255)                                                                                                                                  |                                                                                                                                                    AACAGGCCGATGAGAGCGGCAATGAAGGTTTTCAGTGGTTTGTCACCGGCCATGCCACCCAACGCGACGATGGCGAACACCATCAGCACAAAGTACTCCGCCGGGCCGAAGGCGATGGCCCATTTCGCCAGCAGCGGGGCGAACAGCACCATGCCGCAGGTGGCGATGAAGGCGCCGATGAACGAACTCCAGGCCGACAGCGACAGGGCAACACCGGCCAGGCCCTGGCGGGCCATCGGGTAACCATCGAGGGTGGTCATGACGGTCGAGGCTTCGC  >  NC_002947/1616720‑1616996

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.