New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1724428	33 (0.660)	4 (0.080)	4/244	NT	9.3%	coding (3061/3066 nt)	PP_1517	RND family transporter
	?	NC_002947	= 1724498	47 (0.990)					coding (671/687 nt)	PP_1518	hypothetical protein

CGCGCTGGCGGCGGTGCTGGCCATGATCCCGTTGTCGCGTAGTGTGTTCTACGGGCCGATGGCGGTGGCGATCATGGGCGGGCTGATCGTGGCCACGGTGCTTACACTGCTGTTCCTGCCGGCGTTGTATGCGGCGTGGTTCAGGGTGAAGAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1724274‑1724428 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagaaggTCTTCGGCGCGCTGTAGGAGCGGGTTTACCCGCGAAGGGAGGGCTAAGCCCTCCCCCTGCGGCCTTCAGCCCTTCTTCACCCTGAACCACGCCGCATA  <  NC_002947/1724498‑1724401                                                                                                                                                                                                                                                               CGCGCTGGGGGCGTGGCTCGCCCTGATCCCGTTGTCGCGTAGTGTGTTCTACGGGCCGATGGCGGTGGCGATCATGGGCGGGCTGATCGTGGCCACGGTGCTTACACTGCTGTTCCTGCCGGCGTTGTATGCGGCGTGGTTCAGGGTGA                                                                                                          <  8:271654/149‑1  GCGCTGGCGGCGGTGCTGGCCATGATCCCGTTGTCGCGTAGTGTGTTCTACGGGCCGATGGCGGTGGCGATCATGGGCGGGCTGATCGTGGCCACGGTGCTTACACTGCTGTTCCTGCCGGCGTTGTATGCGGCGTGGTTCAGGGTGAA                                                                                                         <  1:159475/149‑1                                               TTCTACGGGCCGATGGCGGTGGCGATCATGGGCGGGCTGATCGTGGCCACGGTGCTTACACTGCTGTTCCTGCCGGCGTTGTATGCGGCGTGGTTCAGGGTGAAGAAGGTCTTCGGCGCGCTGTAGGAGCGGGTTTACCCGCGAAGG                                                              >  6:96968/1‑147                                                                             GGCGGGCTGATCGTGGCCACGGTGCTTACACTGCTGTTCCTGCCGGCGTTGTATGCGGCGTGGTTCAGGGTGAAGAAGGTCTTCGGCGCGCTGTAGGAGCGGGTTTACCCGCGAAGGGAGGGCTAAGCCCTCCCCCTGCGGCCTTCAG                               <  5:96968/148‑1                                                                                                          ACTGCTGTTCCTGCCGGCGTTGTATGCGGCGTGGTTCAGGGTGAAGAAGGTCTTCGGCGCGCTGTAGGAGCGGGTTTACCCGCGAAGGGAGGGCTAAGCCCTCCCCCTGCGGCCTTCAGCCCTTCTTCAC                    <  7:136256/130‑1                                                                                                          ACTGCTGTTCCTGCCGGCGTTGTATGCGGCGTGGTTCAGGGTGAAGAAGGTCTTCGGCGCGCTGTAGGAGCGGGTTTACCCGCGAAGGGAGGGCTAAGCCCTCCCCCTGCGGCCTTCAGCCCTTCTTCAC                    >  8:136256/1‑130                                                                                                                                                      AGAAGGTCTTCGGCGCGCTGTAGGAGCGGGTTTACCCGCGAAGGGAGGGCTAAGCCCTCCCCCTGCGGCCTTCAGCCCTTCTTCACCCTGAACCACGCCGCATA  <  5:108660/104‑1                                                                                                                                                      AGAAGGTCTTCGGCGCGCTGTAGGAGCGGGTTTACCCGCGAAGGGAGGGCTAAGCCCTCCCCCTGCGGCCTTCAGCCCTTCTTCACCCTGAACCACGCCGCATA  >  6:108660/1‑104                                                                                                                                                                                                                                                               CGCGCTGGCGGCGGTGCTGGCCATGATCCCGTTGTCGCGTAGTGTGTTCTACGGGCCGATGGCGGTGGCGATCATGGGCGGGCTGATCGTGGCCACGGTGCTTACACTGCTGTTCCTGCCGGCGTTGTATGCGGCGTGGTTCAGGGTGAAGAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1724274‑1724428 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagaaggTCTTCGGCGCGCTGTAGGAGCGGGTTTACCCGCGAAGGGAGGGCTAAGCCCTCCCCCTGCGGCCTTCAGCCCTTCTTCACCCTGAACCACGCCGCATA  <  NC_002947/1724498‑1724401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.