| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2051617 = | 42 (0.830) | 6 (0.120) | 6/250 | NT | 12.9% | coding (62/591 nt) | PP_1826 | isochorismatase family hydrolase |
| ? | NC_002947 | 2051652 = | 40 (0.820) | coding (27/591 nt) | PP_1826 | isochorismatase family hydrolase | |||||
TAACCACGCCGCTTGCGTTGTCAACCATTCCCATTGGCGCCAAGGCAGGGGAGAATAGGTATACAAAAGCCCTATCCAAGGAGCCCTTGATGTCCGTTCCAACCACGATGTTTCGCCTCACTGGCCGCGACTATCCGCCGGCCAAGCTGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2051767‑2051617‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgagGCGAAACATCGTGGTTGGAACGGACATCAAGGGCTCCTTGGATAGGGCTTTTGTATACCTATTCTCCCCTGCCTTGGCGCCAATGGGAATGGTTGACAACGCAAGCGGCGTGGTTACTGGCCTGTGGCTAGCCTTTGGGCAAGG > NC_002947/2051652‑2051795 TAACCACGCCGCTTGCGTTGTCAACCATTCCCATTGGCGCCAAGGCAGGGGAGAATAGGTATACAAAAGCCCTATCCAAGGAGCCCTTGATGTCCGTTCCAACCACGATGTTTCGCCTCACTGGCCGCGACTATCCGCCGGCCAAGCTG < 7:72857/149‑1 ACCACGCCGCTTGCGTTGTCAACCATTCCCATTGGCGCCAAGGCAGGGGAGAATAGGTATACAAAAGCCCTATCCAAGGAGCCCTTGATGTCCGTTCCAACCACGATGTTTCGCCTCACTGGCCGCGACTATCCGCCGGCCAAGCTGAG < 7:271133/149‑1 GATGTTTCGCCTCACTGGCCGCGACTATCCGCCGGCCAAGCTGAGGCGAAACATCGTGGTTGGAACGGACATCAAGGGCTCCTTGGATAGGGCTTTTGTATACCTATTCTCCCCTGCCTTGGCGCCAATGGGAATGGTTGACAACGC > 6:273070/1‑147 CTCACTGGCCGCGACTATCCGCCGGCC‑AG‑TGAGGCGAAACATCGTGGTTGGAACGGACATCAAGGGCTCCTTGGATAGGGCTTTTGTATACCTATTCTCCCCTGCCTTGGCGCCAATGGGAATGGTT > 7:111377/1‑127 CTCACTGGCCGCGACTATCCGCCGGCC‑AG‑TGAGGCGAAACATCGTGGTTGGAACGGACATCAAGGGCTCCTTGGATAGGGCTTTTGTATACCTATTCTCCCCTGCCTTGGCGCCAATGGGAATGGTT < 8:111377/127‑1 GCCGCGACTATCCGCCGGCC‑AG‑TGAGGCGAAACATCGTGGTTGGAACGGACATCAAGGGCTCCTTGGATAGGGCTTTTGTATACCTATTCTCCCCTGCCTTGGCGCCAATGGAAATGGTTGACAACGCAAGCGGCGTGGTTACTGGCCT > 2:125388/1‑149 GCGACTATCCGCCGGCCAAGCTGAGGCGAAACATCGTGGTTGGAACGGACATCAAGGGCTCCTTGGATAGGGCTTTTG > 7:291086/1‑78 GCGACTATCCGCCGGCCAAGCTGAGGCGAAACATCGTGGTTGGAACGGACATCAAGGGCTCCTTGGATAGGGCTTTTG < 8:291086/78‑1 TGAGGCGAAACATCGTGGTTGGAACGGACATCAAGGGCTCCTTGGATAGGGCTTTTGTATACCTATTCTCCCCTGCCTTGGCGCCAATGGGAATGGTTGACAACGCAAGCGGCGTGGTTACTGGCCTGTGGCTAGCCTTTGGGCAAGG > 2:152988/1‑148 TAACCACGCCGCTTGCGTTGTCAACCATTCCCATTGGCGCCAAGGCAGGGGAGAATAGGTATACAAAAGCCCTATCCAAGGAGCCCTTGATGTCCGTTCCAACCACGATGTTTCGCCTCACTGGCCGCGACTATCCGCCGGCCAAGCTGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2051767‑2051617‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgagGCGAAACATCGTGGTTGGAACGGACATCAAGGGCTCCTTGGATAGGGCTTTTGTATACCTATTCTCCCCTGCCTTGGCGCCAATGGGAATGGTTGACAACGCAAGCGGCGTGGTTACTGGCCTGTGGCTAGCCTTTGGGCAAGG > NC_002947/2051652‑2051795 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |