New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2420112	58 (1.150)	4 (0.080)	4/250	NT	6.4%	coding (1263/1668 nt)	ctpH	methyl‑accepting chemotaxis protein CtpH
	?	NC_002947	= 2420145	60 (1.230)					coding (1296/1668 nt)	ctpH	methyl‑accepting chemotaxis protein CtpH

GGCAACGGTAATTCGCGATCTGGAGCATGACAGCACACGGATAGGCAAAGTGCTGGAAGTGATCCGCGGCATTGCTGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2419962‑2420112 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgCTGGGCCAGGCTACGCACTTCATCGGCGACCACCGCAAAACCACGCCCGGCTTCGCCAGCACGGGCCGCTTCGATGGCCGCGTTAAGCGCCAGCAGGTTGGTCTGTTCAGCAATGCCGCGGATCACTTCCAGCACTTTGCCTATCC  <  NC_002947/2420145‑2420000                                                                                                                                                                                                                                                                                                           GGCAACGGTAATTCGCGATCTGGAGCATGACAGCACACGGATAGGCAAAGTGCTGGAAGTGATCCGCGGCATTGCTGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTG                                                                                                                                                      >  2:293456/1‑149                                   ACACGGATAGGCAAAGTGCTGGAAGTGATCCGCGGCATTGCTGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGCTGGGCCAGGCTACGCACTTCATCGGCGACCA                                                                                                                    >  4:115663/1‑149                                          TAGGCAAAGTGCTGGAAGTGATCCGCGGCATTGCTGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGCTGGGCCAGGCTACGCACTTCATCGGCGACCACCGCAAA                                                                                                             <  3:115663/149‑1                                                   TGCTGGAAGTGATCCGCGGCATTGCTGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTTCGCGGGGCCAGGCTACGCACTTCATCGGCGACCACCCCAAAACCACacat                                                                                                    >  5:52756/1‑145                                                   TGCTGGAAGTGATCCGCGGCATTGCTGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGCTGGGCCAGGCTACGCACTTCATCGGCGACCACCGCAAAACCA                                                                                                         <  6:52756/144‑1                                                                                                                                                      CGCTGGGCCAGGCTACGCACTTCATCGGCGACCACCGCAAAACCACGCCCGGCTTCGCCAGCACGGGCCGCTTCGATGGCCGCGTTAAGCGCCAGCAGGTTGGTCTGTTCAGCAATGCCGCGGATCACTTCCAGCACTTTGCCTATCC  <  3:228637/148‑1                                                                                                                                                                                                                                                                                                           GGCAACGGTAATTCGCGATCTGGAGCATGACAGCACACGGATAGGCAAAGTGCTGGAAGTGATCCGCGGCATTGCTGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2419962‑2420112 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgCTGGGCCAGGCTACGCACTTCATCGGCGACCACCGCAAAACCACGCCCGGCTTCGCCAGCACGGGCCGCTTCGATGGCCGCGTTAAGCGCCAGCAGGTTGGTCTGTTCAGCAATGCCGCGGATCACTTCCAGCACTTTGCCTATCC  <  NC_002947/2420145‑2420000

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.