New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2420112	58 (1.150)	4 (0.080)	4/250	NT	6.4%	coding (1263/1668 nt)	ctpH	methyl‑accepting chemotaxis protein CtpH
	?	NC_002947	= 2420145	60 (1.230)					coding (1296/1668 nt)	ctpH	methyl‑accepting chemotaxis protein CtpH

GGATAGGCAAAGTGCTGGAAGTGATCCGCGGCATTGCTGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGCCAGGAAGGGGCTGAGCAAGTCGAGCAGGCCGGGCAGATGCTGCAAC  >  NC_002947/2420000‑2420293                                                                                                                                                  |                                                                                                                                                     ggATAGGCAAAGTGCTGGAAGTGATCCGCGGCATTGCTGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGcg                                                                                                                                                    <  3:228637‑M2/148‑3 (MQ=255)      ggCAAAGTGCTGGAAGTGATCCGCGGCATTGCTGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGc                                                                                                                                              <  1:81130/149‑1 (MQ=255)            gTGCTGGAAGTGATCCGCGGCATTGCTGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTc                                                                                                                                        >  3:205781/1‑149 (MQ=255)               cTGGAAGTGATCCGCGGCATTGCTGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGAt                                                                                                                                     <  4:229081/149‑1 (MQ=255)                  gAAGTGATCCGCTGCATTGCTGAACAGACCCACCTGCTGGCGCTTACCGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGAtt                                                                                                                                    <  1:304782/147‑1 (MQ=255)                  gAAGGGATCCGCGGCATTGCTGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGc                                                                                                                                  <  4:110878/149‑1 (MQ=255)                      tGATCCGCGGCATTGCTGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGa                                                                                                                                      <  2:290879/141‑1 (MQ=255)                      tGATCCGCGGCATTGCTGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGa                                                                                                                                      >  1:290879/1‑141 (MQ=255)                        aTCCGCGGCATTGCTGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAAt                                                                                                                            >  4:293490/1‑149 (MQ=255)                         tCCGCGGCATTGCTGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGAGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAAt                                                                                                                            <  7:208057/148‑1 (MQ=255)                              ggCATTGCTGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCa                                                                                                                      <  4:228637/149‑1 (MQ=255)                                      tGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGatcatc                                                                                                               >  7:160065/1‑148 (MQ=255)                                           aGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGATGCg                                                                                                         >  4:265677/1‑149 (MQ=255)                                           aGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCg                                                                                                         >  7:148552/1‑149 (MQ=255)                                           aGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCg                                                                                                         >  5:104519/1‑149 (MQ=255)                                            gACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCgg                                                                                                        <  8:148552/149‑1 (MQ=255)                                                  ccTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGAGAAGCCGGGCGTGGTTTTGAGCTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGAGTCGATTGCAGAAATTAACCAGATCATCGAAGCCGTACAg                                                                                                   >  7:131589/1‑148 (MQ=38)                                                   ctgctgGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGt                                                                                                  >  4:205375/1‑148 (MQ=255)                                                       tgGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAggg                                                                                             >  4:55083/1‑149 (MQ=255)                                                           gcTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCg                                                                                                              <  6:101096/128‑1 (MQ=255)                                                           gcTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCg                                                                                                              >  5:101096/1‑128 (MQ=255)                                                           gcTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGTGGCtg                                                                                         <  3:55083/149‑1 (MQ=255)                                                               aaCGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCtgtg                                                                                       <  4:205781/147‑1 (MQ=255)                                                                    ggCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGCCAGTGGAGGCgg                                                                                >  6:265844/1‑149 (MQ=255)                                                                       cATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTc                                                                              >  8:55404/1‑148 (MQ=255)                                                                            aaGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAg                                                                                               >  3:268994/1‑126 (MQ=255)                                                                            aaGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAg                                                                                               <  4:268994/126‑1 (MQ=255)                                                                            aaGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGc                                                                         >  4:136240/1‑148 (MQ=255)                                                                             aGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCa                                                                       >  7:105595/1‑149 (MQ=255)                                                                                 gCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGt                                                                               >  6:87238/1‑137 (MQ=255)                                                                                 gCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGt                                                                               <  5:87238/137‑1 (MQ=255)                                                                                  cccGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGt                                                                                                       >  5:185159/1‑112 (MQ=255)                                                                                  cccGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGt                                                                                                       <  6:185159/112‑1 (MQ=255)                                                                                  cccGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCg                                                                                 <  4:76362/134‑1 (MQ=255)                                                                                  cccGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCg                                                                                 >  3:76362/1‑134 (MQ=255)                                                                                   ccGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGaaa                                                                 <  7:55404/149‑1 (MQ=255)                                                                                      tGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGTTCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTg                                                              <  8:269405/149‑1 (MQ=255)                                                                                       gCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTgg                                                                                      >  5:123247/1‑124 (MQ=255)                                                                                       gCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTgg                                                                                      <  6:123247/124‑1 (MQ=255)                                                                                       gCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGt                                                               <  1:318923/147‑1 (MQ=255)                                                                                       gCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGt                                                               >  2:318923/1‑147 (MQ=255)                                                                                       gCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTgg                                                             >  5:297520/1‑149 (MQ=255)                                                                                        cTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGc                                                            <  3:205375/149‑1 (MQ=255)                                                                                           gCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAg                                                         >  8:151828/1‑149 (MQ=255)                                                                                           gCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCG‑AAGTGGCCAg                                                         >  2:35039/1‑148 (MQ=255)                                                                                             gAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGc                                                                                                                                           >  5:111162/1‑65 (MQ=255)                                                                                             gAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGc                                                                                                                                           <  6:111162/65‑1 (MQ=255)                                                                                                  cGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACgg                                                                                                                                               <  8:57369/56‑1 (MQ=255)                                                                                                  cGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACgg                                                                                                                                               >  7:57369/1‑56 (MQ=255)                                                                                                   atgtgtggtTTTGGGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCCGcgaaaaaccacgcccggcttcgccagcacgggccgcttcgatggccgcgttaagcgccagcaggttggtctgttcagcaatgccgcggatcacttccagca                                                 >  5:52756‑M2/5‑48 (MQ=255)                                                                                                     gCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGcc                                               <  7:151828/149‑1 (MQ=255)                                                                                                      cGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGCCa                                              <  6:297520/149‑1 (MQ=255)                                                                                                        tGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGcgcaaaaccacgcccggcttcgccagcacgggccgcttcgatggccgcgttaagcgccagcaggttggtctgttcagcaatgccgcggatcacttccagca                                                 <  6:52756‑M2/144‑102 (MQ=255)                                                                                                          gTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGCCAGGa                                           <  8:105595/148‑1 (MQ=255)                                                                                                            tttGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGcgcaaaaccacgcccggcttcgccagcacgggccgcttcgatggccgcgttaagcgccagcaggttggtctgttcagcaatgccgcggatcacttccagcactttgccta                                        <  3:115663‑M2/149‑111 (MQ=255)                                                                                                              tGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGCCAGGAAggg                                       <  2:251359/148‑1 (MQ=255)                                                                                                                   tggtCGCCGATGAAGTGCGTAGCCTGGCCCAGcgcaaaaccacgcccggcttcgccagcacgggccgcttcgatggccgcgttaagcgccagcaggttggtctgttcagcaatgccgcggatcacttccagcactttgcctatccgtgt                                 >  4:115663‑M2/1‑32 (MQ=255)                                                                                                                      tCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGCCAGGAAGGGGCTGAGCaa                              <  3:293490/149‑1 (MQ=255)                                                                                                                       cGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGCCAGGAAGGGGCTGa                                  <  8:182722/144‑1 (MQ=255)                                                                                                                       cGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGCCAGGAAGGGGCTGAgagat                             >  7:182722/1‑145 (MQ=255)                                                                                                                        gCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGCCAGGAAGGGGCTGAGCAAGt                            <  3:136240/149‑1 (MQ=255)                                                                                                                           gATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCG‑AAGTGGCCAGCAACGTAGCCAGGAAGGGGCTGAGCAAGTCGAg                        <  1:35039/149‑1 (MQ=255)                                                                                                                            aTGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGCCAGGAAGGGGCTGAGCAAGTCGAg                        <  6:104519/149‑1 (MQ=255)                                                                                                                                    cGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGGGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGCCAGGAAGGGGCTGAGCAATTCGCGCAGGCCgg                >  2:305218/1‑149 (MQ=255)                                                                                                                                    cGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCGGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGCCAGGAAGGGGCTTCGCAAGTCGAGCAGGCCgg                >  2:300451/1‑149 (MQ=255)                                                                                                                                     gTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGCCAGGAAGGGGCTGAGCAAGTCGAGCAGGCCggg               <  5:265844/149‑1 (MQ=255)                                                                                                                                      tAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGCCAGGAAGGGGCTGAGCAAGTCGAGCAGGCCg                 >  4:154206/1‑146 (MQ=255)                                                                                                                                      tAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGCCAGGAAGGGGCTGAGCAAGTCGAGCAGGCCg                 <  3:154206/146‑1 (MQ=255)                                                                                                                                               ccAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGCCAGGAAGGGGCTGAGCAAGTCGAGCAGGCCGGGCAGAtgctg      >  2:230831/1‑148 (MQ=255)                                                                                                                                                cAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGCCAGGAAGGGGCTGAGCAAGTCGAGCAGGCCGGGc              >  3:53882/1‑139 (MQ=255)                                                                                                                                                cAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGCCAGGAAGGGGCTGAGCAAGTCGAGCAGGCCGGGc              <  4:53882/139‑1 (MQ=255)                                                                                                                                                  gcgcACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGCCAGGAAGGGGCTGAGCAAGTCGAGCAGGCCGGGCAGATGCTGCAAc  <  8:160065/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     GGATAGGCAAAGTGCTGGAAGTGATCCGCGGCATTGCTGAACAGACCAACCTGCTGGCGCTTAACGCGGCCATCGAAGCGGCCCGTGCTGGCGAAGCCGGGCGTGGTTTTGCGGTGGTCGCCGATGAAGTGCGTAGCCTGGCCCAGCGCACGGCAGCGTCGATTGCAGAAATTCACCAGATCATCGAAGCGGTACAGTCAGGGGCTGTGGAGGCGGTCAAGGCCATCGAAAGTGGCCAGCAACGTAGCCAGGAAGGGGCTGAGCAAGTCGAGCAGGCCGGGCAGATGCTGCAAC  >  NC_002947/2420000‑2420293

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.